Gene : Cagra.1085s0072 C. grandiflora v1.1
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  72
Name:  ? Cagra.1085s0072 Secondary Identifier:  ? PAC:28900602
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1001 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0072 0.5kb upstream 0.5kb upstream 6179 true Scaffold1085: 269959-276137 Capsella grandiflora
Cagra.1085s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 275638-276137 Capsella grandiflora
Cagra.1085s0072 0.5kb downstream 0.5kb downstream 6179 true Scaffold1085: 269459-275637 Capsella grandiflora
Cagra.1085s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 269459-269958 Capsella grandiflora
Cagra.1085s0072 1.0kb upstream 1.0kb upstream 6679 true Scaffold1085: 269959-276637 Capsella grandiflora
Cagra.1085s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 275638-276637 Capsella grandiflora
Cagra.1085s0072 1.0kb downstream 1.0kb downstream 6679 true Scaffold1085: 268959-275637 Capsella grandiflora
Cagra.1085s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 268959-269958 Capsella grandiflora
Cagra.1085s0072 2.0kb upstream 2.0kb upstream 7679 true Scaffold1085: 269959-277637 Capsella grandiflora
Cagra.1085s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 275638-277637 Capsella grandiflora
Cagra.1085s0072 2.0kb downstream 2.0kb downstream 7679 true Scaffold1085: 267959-275637 Capsella grandiflora
Cagra.1085s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 267959-269958 Capsella grandiflora
Cagra.1085s0072 5.0kb upstream 5.0kb upstream 10679 true Scaffold1085: 269959-280637 Capsella grandiflora
Cagra.1085s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 275638-280637 Capsella grandiflora
Cagra.1085s0072 5.0kb downstream 5.0kb downstream 10679 true Scaffold1085: 264959-275637 Capsella grandiflora
Cagra.1085s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 264959-269958 Capsella grandiflora
Cagra.1085s0072 10.0kb upstream 10.0kb upstream 15679 true Scaffold1085: 269959-285637 Capsella grandiflora
Cagra.1085s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 275638-285637 Capsella grandiflora
Cagra.1085s0072 10.0kb downstream 10.0kb downstream 15679 true Scaffold1085: 259959-275637 Capsella grandiflora
Cagra.1085s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 259959-269958 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373968 5261 Brassicaceae View MSA
123800654 5264 Brassicales-Malvales View MSA
124298044 5266 SBM View MSA
124149784 5268 Malvidae View MSA
123875523 5270 Rosid View MSA
123746162 5271 Pentapetalae View MSA
122771799 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain