Gene : Cagra.1085s0078 C. grandiflora v1.1
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  78
Name:  ? Cagra.1085s0078 Secondary Identifier:  ? PAC:28900571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0078 0.5kb upstream 0.5kb upstream 2086 true Scaffold1085: 294521-296606 Capsella grandiflora
Cagra.1085s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 294521-295020 Capsella grandiflora
Cagra.1085s0078 0.5kb downstream 0.5kb downstream 2086 true Scaffold1085: 295021-297106 Capsella grandiflora
Cagra.1085s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 296607-297106 Capsella grandiflora
Cagra.1085s0078 1.0kb upstream 1.0kb upstream 2586 true Scaffold1085: 294021-296606 Capsella grandiflora
Cagra.1085s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 294021-295020 Capsella grandiflora
Cagra.1085s0078 1.0kb downstream 1.0kb downstream 2586 true Scaffold1085: 295021-297606 Capsella grandiflora
Cagra.1085s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 296607-297606 Capsella grandiflora
Cagra.1085s0078 2.0kb upstream 2.0kb upstream 3586 true Scaffold1085: 293021-296606 Capsella grandiflora
Cagra.1085s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 293021-295020 Capsella grandiflora
Cagra.1085s0078 2.0kb downstream 2.0kb downstream 3586 true Scaffold1085: 295021-298606 Capsella grandiflora
Cagra.1085s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 296607-298606 Capsella grandiflora
Cagra.1085s0078 5.0kb upstream 5.0kb upstream 6586 true Scaffold1085: 290021-296606 Capsella grandiflora
Cagra.1085s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 290021-295020 Capsella grandiflora
Cagra.1085s0078 5.0kb downstream 5.0kb downstream 6586 true Scaffold1085: 295021-301606 Capsella grandiflora
Cagra.1085s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 296607-301606 Capsella grandiflora
Cagra.1085s0078 10.0kb upstream 10.0kb upstream 11586 true Scaffold1085: 285021-296606 Capsella grandiflora
Cagra.1085s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 285021-295020 Capsella grandiflora
Cagra.1085s0078 10.0kb downstream 10.0kb downstream 11586 true Scaffold1085: 295021-306606 Capsella grandiflora
Cagra.1085s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 296607-306606 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369666 5261 Brassicaceae View MSA
123832136 5264 Brassicales-Malvales View MSA
124340399 5266 SBM View MSA
124242755 5268 Malvidae View MSA
124066778 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain