Gene : Cagra.1085s0075 C. grandiflora v1.1
Defline:  (1 of 10) PTHR15141 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 Genomic Order:  75
Name:  ? Cagra.1085s0075 Secondary Identifier:  ? PAC:28900597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0075 0.5kb upstream 0.5kb upstream 2904 true Scaffold1085: 285349-288252 Capsella grandiflora
Cagra.1085s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 285349-285848 Capsella grandiflora
Cagra.1085s0075 0.5kb downstream 0.5kb downstream 2904 true Scaffold1085: 285849-288752 Capsella grandiflora
Cagra.1085s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 288253-288752 Capsella grandiflora
Cagra.1085s0075 1.0kb upstream 1.0kb upstream 3404 true Scaffold1085: 284849-288252 Capsella grandiflora
Cagra.1085s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 284849-285848 Capsella grandiflora
Cagra.1085s0075 1.0kb downstream 1.0kb downstream 3404 true Scaffold1085: 285849-289252 Capsella grandiflora
Cagra.1085s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 288253-289252 Capsella grandiflora
Cagra.1085s0075 2.0kb upstream 2.0kb upstream 4404 true Scaffold1085: 283849-288252 Capsella grandiflora
Cagra.1085s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 283849-285848 Capsella grandiflora
Cagra.1085s0075 2.0kb downstream 2.0kb downstream 4404 true Scaffold1085: 285849-290252 Capsella grandiflora
Cagra.1085s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 288253-290252 Capsella grandiflora
Cagra.1085s0075 5.0kb upstream 5.0kb upstream 7404 true Scaffold1085: 280849-288252 Capsella grandiflora
Cagra.1085s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 280849-285848 Capsella grandiflora
Cagra.1085s0075 5.0kb downstream 5.0kb downstream 7404 true Scaffold1085: 285849-293252 Capsella grandiflora
Cagra.1085s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 288253-293252 Capsella grandiflora
Cagra.1085s0075 10.0kb upstream 10.0kb upstream 12404 true Scaffold1085: 275849-288252 Capsella grandiflora
Cagra.1085s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 275849-285848 Capsella grandiflora
Cagra.1085s0075 10.0kb downstream 10.0kb downstream 12404 true Scaffold1085: 285849-298252 Capsella grandiflora
Cagra.1085s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 288253-298252 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360758 5261 Brassicaceae View MSA
123837314 5264 Brassicales-Malvales View MSA
124349395 5266 SBM View MSA
124243925 5268 Malvidae View MSA
124072359 5270 Rosid View MSA
123737079 5271 Pentapetalae View MSA
122790129 5272 Eudicot View MSA
122047602 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain