Gene : Cagra.1043s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23324:SF57 - PATELLIN-6 Genomic Order:  42
Name:  ? Cagra.1043s0042 Secondary Identifier:  ? PAC:28897707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0042 0.5kb upstream 0.5kb upstream 2982 true Scaffold1043: 145721-148702 Capsella grandiflora
Cagra.1043s0042 0.5kb upstream 0.5kb upstream 465 false Scaffold1043: 148238-148702 Capsella grandiflora
Cagra.1043s0042 0.5kb downstream 0.5kb downstream 3017 true Scaffold1043: 145221-148237 Capsella grandiflora
Cagra.1043s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 145221-145720 Capsella grandiflora
Cagra.1043s0042 1.0kb upstream 1.0kb upstream 2982 true Scaffold1043: 145721-148702 Capsella grandiflora
Cagra.1043s0042 1.0kb upstream 1.0kb upstream 465 false Scaffold1043: 148238-148702 Capsella grandiflora
Cagra.1043s0042 1.0kb downstream 1.0kb downstream 3517 true Scaffold1043: 144721-148237 Capsella grandiflora
Cagra.1043s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 144721-145720 Capsella grandiflora
Cagra.1043s0042 2.0kb upstream 2.0kb upstream 2982 true Scaffold1043: 145721-148702 Capsella grandiflora
Cagra.1043s0042 2.0kb upstream 2.0kb upstream 465 false Scaffold1043: 148238-148702 Capsella grandiflora
Cagra.1043s0042 2.0kb downstream 2.0kb downstream 4517 true Scaffold1043: 143721-148237 Capsella grandiflora
Cagra.1043s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 143721-145720 Capsella grandiflora
Cagra.1043s0042 5.0kb upstream 5.0kb upstream 2982 true Scaffold1043: 145721-148702 Capsella grandiflora
Cagra.1043s0042 5.0kb upstream 5.0kb upstream 465 false Scaffold1043: 148238-148702 Capsella grandiflora
Cagra.1043s0042 5.0kb downstream 5.0kb downstream 7517 true Scaffold1043: 140721-148237 Capsella grandiflora
Cagra.1043s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 140721-145720 Capsella grandiflora
Cagra.1043s0042 10.0kb upstream 10.0kb upstream 2982 true Scaffold1043: 145721-148702 Capsella grandiflora
Cagra.1043s0042 10.0kb upstream 10.0kb upstream 465 false Scaffold1043: 148238-148702 Capsella grandiflora
Cagra.1043s0042 10.0kb downstream 10.0kb downstream 12517 true Scaffold1043: 135721-148237 Capsella grandiflora
Cagra.1043s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 135721-145720 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362041 5261 Brassicaceae View MSA
123841619 5264 Brassicales-Malvales View MSA
124343637 5266 SBM View MSA
124241285 5268 Malvidae View MSA
124061796 5270 Rosid View MSA
123743132 5271 Pentapetalae View MSA
122791102 5272 Eudicot View MSA
122041673 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350368 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain