Gene : Cagra.1043s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32444:SF6 - D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  39
Name:  ? Cagra.1043s0039 Secondary Identifier:  ? PAC:28897719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0039 0.5kb upstream 0.5kb upstream 2056 true Scaffold1043: 134299-136354 Capsella grandiflora
Cagra.1043s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 135855-136354 Capsella grandiflora
Cagra.1043s0039 0.5kb downstream 0.5kb downstream 2056 true Scaffold1043: 133799-135854 Capsella grandiflora
Cagra.1043s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 133799-134298 Capsella grandiflora
Cagra.1043s0039 1.0kb upstream 1.0kb upstream 2556 true Scaffold1043: 134299-136854 Capsella grandiflora
Cagra.1043s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 135855-136854 Capsella grandiflora
Cagra.1043s0039 1.0kb downstream 1.0kb downstream 2556 true Scaffold1043: 133299-135854 Capsella grandiflora
Cagra.1043s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 133299-134298 Capsella grandiflora
Cagra.1043s0039 2.0kb upstream 2.0kb upstream 3556 true Scaffold1043: 134299-137854 Capsella grandiflora
Cagra.1043s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 135855-137854 Capsella grandiflora
Cagra.1043s0039 2.0kb downstream 2.0kb downstream 3556 true Scaffold1043: 132299-135854 Capsella grandiflora
Cagra.1043s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 132299-134298 Capsella grandiflora
Cagra.1043s0039 5.0kb upstream 5.0kb upstream 6556 true Scaffold1043: 134299-140854 Capsella grandiflora
Cagra.1043s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 135855-140854 Capsella grandiflora
Cagra.1043s0039 5.0kb downstream 5.0kb downstream 6556 true Scaffold1043: 129299-135854 Capsella grandiflora
Cagra.1043s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 129299-134298 Capsella grandiflora
Cagra.1043s0039 10.0kb upstream 10.0kb upstream 11556 true Scaffold1043: 134299-145854 Capsella grandiflora
Cagra.1043s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 135855-145854 Capsella grandiflora
Cagra.1043s0039 10.0kb downstream 10.0kb downstream 11556 true Scaffold1043: 124299-135854 Capsella grandiflora
Cagra.1043s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 124299-134298 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
122364459 5261 Brassicaceae View MSA
123827697 5264 Brassicales-Malvales View MSA
124340619 5266 SBM View MSA
124237095 5268 Malvidae View MSA
124061052 5270 Rosid View MSA
123746754 5271 Pentapetalae View MSA
122790978 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain