Gene : Cagra.1062s0039 C. grandiflora v1.1
Defline:  (1 of 4) PTHR18952:SF118 - ALPHA CARBONIC ANHYDRASE 6 Genomic Order:  39
Name:  ? Cagra.1062s0039 Secondary Identifier:  ? PAC:28908901
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0039 0.5kb upstream 0.5kb upstream 1846 true Scaffold1062: 124544-126389 Capsella grandiflora
Cagra.1062s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1062: 125890-126389 Capsella grandiflora
Cagra.1062s0039 0.5kb downstream 0.5kb downstream 1846 true Scaffold1062: 124044-125889 Capsella grandiflora
Cagra.1062s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 124044-124543 Capsella grandiflora
Cagra.1062s0039 1.0kb upstream 1.0kb upstream 2346 true Scaffold1062: 124544-126889 Capsella grandiflora
Cagra.1062s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1062: 125890-126889 Capsella grandiflora
Cagra.1062s0039 1.0kb downstream 1.0kb downstream 2346 true Scaffold1062: 123544-125889 Capsella grandiflora
Cagra.1062s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 123544-124543 Capsella grandiflora
Cagra.1062s0039 2.0kb upstream 2.0kb upstream 3346 true Scaffold1062: 124544-127889 Capsella grandiflora
Cagra.1062s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1062: 125890-127889 Capsella grandiflora
Cagra.1062s0039 2.0kb downstream 2.0kb downstream 3346 true Scaffold1062: 122544-125889 Capsella grandiflora
Cagra.1062s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 122544-124543 Capsella grandiflora
Cagra.1062s0039 5.0kb upstream 5.0kb upstream 6346 true Scaffold1062: 124544-130889 Capsella grandiflora
Cagra.1062s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1062: 125890-130889 Capsella grandiflora
Cagra.1062s0039 5.0kb downstream 5.0kb downstream 6346 true Scaffold1062: 119544-125889 Capsella grandiflora
Cagra.1062s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 119544-124543 Capsella grandiflora
Cagra.1062s0039 10.0kb upstream 10.0kb upstream 11346 true Scaffold1062: 124544-135889 Capsella grandiflora
Cagra.1062s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1062: 125890-135889 Capsella grandiflora
Cagra.1062s0039 10.0kb downstream 10.0kb downstream 11346 true Scaffold1062: 114544-125889 Capsella grandiflora
Cagra.1062s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 114544-124543 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367124 5261 Brassicaceae View MSA
123829371 5264 Brassicales-Malvales View MSA
124339890 5266 SBM View MSA
124254453 5268 Malvidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain