Gene : Cagra.1062s0037 C. grandiflora v1.1
Defline:  (1 of 4) PTHR18952:SF118 - ALPHA CARBONIC ANHYDRASE 6 Genomic Order:  37
Name:  ? Cagra.1062s0037 Secondary Identifier:  ? PAC:28908854
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0037 0.5kb upstream 0.5kb upstream 1572 true Scaffold1062: 121592-123163 Capsella grandiflora
Cagra.1062s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold1062: 122664-123163 Capsella grandiflora
Cagra.1062s0037 0.5kb downstream 0.5kb downstream 1572 true Scaffold1062: 121092-122663 Capsella grandiflora
Cagra.1062s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 121092-121591 Capsella grandiflora
Cagra.1062s0037 1.0kb upstream 1.0kb upstream 2072 true Scaffold1062: 121592-123663 Capsella grandiflora
Cagra.1062s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold1062: 122664-123663 Capsella grandiflora
Cagra.1062s0037 1.0kb downstream 1.0kb downstream 2072 true Scaffold1062: 120592-122663 Capsella grandiflora
Cagra.1062s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 120592-121591 Capsella grandiflora
Cagra.1062s0037 2.0kb upstream 2.0kb upstream 3072 true Scaffold1062: 121592-124663 Capsella grandiflora
Cagra.1062s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold1062: 122664-124663 Capsella grandiflora
Cagra.1062s0037 2.0kb downstream 2.0kb downstream 3072 true Scaffold1062: 119592-122663 Capsella grandiflora
Cagra.1062s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 119592-121591 Capsella grandiflora
Cagra.1062s0037 5.0kb upstream 5.0kb upstream 6072 true Scaffold1062: 121592-127663 Capsella grandiflora
Cagra.1062s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold1062: 122664-127663 Capsella grandiflora
Cagra.1062s0037 5.0kb downstream 5.0kb downstream 6072 true Scaffold1062: 116592-122663 Capsella grandiflora
Cagra.1062s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 116592-121591 Capsella grandiflora
Cagra.1062s0037 10.0kb upstream 10.0kb upstream 11072 true Scaffold1062: 121592-132663 Capsella grandiflora
Cagra.1062s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold1062: 122664-132663 Capsella grandiflora
Cagra.1062s0037 10.0kb downstream 10.0kb downstream 11072 true Scaffold1062: 111592-122663 Capsella grandiflora
Cagra.1062s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 111592-121591 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792568 5273 Angiosperm View MSA
122332284 5261 Brassicaceae Singleton cluster - no MSA
123773368 5264 Brassicales-Malvales Singleton cluster - no MSA
124271856 5266 SBM Singleton cluster - no MSA
124127803 5268 Malvidae Singleton cluster - no MSA
123856608 5270 Rosid Singleton cluster - no MSA
123442516 5271 Pentapetalae Singleton cluster - no MSA
122798157 5272 Eudicot View MSA
121063788 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain