Gene : Cagra.1062s0041 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  41
Name:  ? Cagra.1062s0041 Secondary Identifier:  ? PAC:28908852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0041 0.5kb upstream 0.5kb upstream 1688 true Scaffold1062: 129055-130742 Capsella grandiflora
Cagra.1062s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold1062: 130243-130742 Capsella grandiflora
Cagra.1062s0041 0.5kb downstream 0.5kb downstream 1688 true Scaffold1062: 128555-130242 Capsella grandiflora
Cagra.1062s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 128555-129054 Capsella grandiflora
Cagra.1062s0041 1.0kb upstream 1.0kb upstream 2188 true Scaffold1062: 129055-131242 Capsella grandiflora
Cagra.1062s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold1062: 130243-131242 Capsella grandiflora
Cagra.1062s0041 1.0kb downstream 1.0kb downstream 2188 true Scaffold1062: 128055-130242 Capsella grandiflora
Cagra.1062s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 128055-129054 Capsella grandiflora
Cagra.1062s0041 2.0kb upstream 2.0kb upstream 3188 true Scaffold1062: 129055-132242 Capsella grandiflora
Cagra.1062s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold1062: 130243-132242 Capsella grandiflora
Cagra.1062s0041 2.0kb downstream 2.0kb downstream 3188 true Scaffold1062: 127055-130242 Capsella grandiflora
Cagra.1062s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 127055-129054 Capsella grandiflora
Cagra.1062s0041 5.0kb upstream 5.0kb upstream 6188 true Scaffold1062: 129055-135242 Capsella grandiflora
Cagra.1062s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold1062: 130243-135242 Capsella grandiflora
Cagra.1062s0041 5.0kb downstream 5.0kb downstream 6188 true Scaffold1062: 124055-130242 Capsella grandiflora
Cagra.1062s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 124055-129054 Capsella grandiflora
Cagra.1062s0041 10.0kb upstream 10.0kb upstream 11188 true Scaffold1062: 129055-140242 Capsella grandiflora
Cagra.1062s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold1062: 130243-140242 Capsella grandiflora
Cagra.1062s0041 10.0kb downstream 10.0kb downstream 11188 true Scaffold1062: 119055-130242 Capsella grandiflora
Cagra.1062s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 119055-129054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122363928 5261 Brassicaceae View MSA
123839972 5264 Brassicales-Malvales View MSA
124343731 5266 SBM View MSA
124253277 5268 Malvidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain