Gene : Cagra.1062s0054 C. grandiflora v1.1
Defline:  (1 of 5) PTHR32448:SF34 - F22M8.11 PROTEIN-RELATED Genomic Order:  54
Name:  ? Cagra.1062s0054 Secondary Identifier:  ? PAC:28908847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0054 0.5kb upstream 0.5kb upstream 2748 true Scaffold1062: 184406-187153 Capsella grandiflora
Cagra.1062s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold1062: 186654-187153 Capsella grandiflora
Cagra.1062s0054 0.5kb downstream 0.5kb downstream 2748 true Scaffold1062: 183906-186653 Capsella grandiflora
Cagra.1062s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 183906-184405 Capsella grandiflora
Cagra.1062s0054 1.0kb upstream 1.0kb upstream 3248 true Scaffold1062: 184406-187653 Capsella grandiflora
Cagra.1062s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold1062: 186654-187653 Capsella grandiflora
Cagra.1062s0054 1.0kb downstream 1.0kb downstream 3248 true Scaffold1062: 183406-186653 Capsella grandiflora
Cagra.1062s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 183406-184405 Capsella grandiflora
Cagra.1062s0054 2.0kb upstream 2.0kb upstream 4248 true Scaffold1062: 184406-188653 Capsella grandiflora
Cagra.1062s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold1062: 186654-188653 Capsella grandiflora
Cagra.1062s0054 2.0kb downstream 2.0kb downstream 4248 true Scaffold1062: 182406-186653 Capsella grandiflora
Cagra.1062s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 182406-184405 Capsella grandiflora
Cagra.1062s0054 5.0kb upstream 5.0kb upstream 7248 true Scaffold1062: 184406-191653 Capsella grandiflora
Cagra.1062s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold1062: 186654-191653 Capsella grandiflora
Cagra.1062s0054 5.0kb downstream 5.0kb downstream 7248 true Scaffold1062: 179406-186653 Capsella grandiflora
Cagra.1062s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 179406-184405 Capsella grandiflora
Cagra.1062s0054 10.0kb upstream 10.0kb upstream 12248 true Scaffold1062: 184406-196653 Capsella grandiflora
Cagra.1062s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold1062: 186654-196653 Capsella grandiflora
Cagra.1062s0054 10.0kb downstream 10.0kb downstream 12248 true Scaffold1062: 174406-186653 Capsella grandiflora
Cagra.1062s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 174406-184405 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373965 5261 Brassicaceae View MSA
123835377 5264 Brassicales-Malvales View MSA
124322041 5266 SBM View MSA
124247902 5268 Malvidae View MSA
124069535 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain