Gene : Cagra.1078s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24073:SF582 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.1078s0012 Secondary Identifier:  ? PAC:28908689
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1078s0012 0.5kb upstream 0.5kb upstream 2579 true Scaffold1078: 36978-39556 Capsella grandiflora
Cagra.1078s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1078: 39057-39556 Capsella grandiflora
Cagra.1078s0012 0.5kb downstream 0.5kb downstream 2579 true Scaffold1078: 36478-39056 Capsella grandiflora
Cagra.1078s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1078: 36478-36977 Capsella grandiflora
Cagra.1078s0012 1.0kb upstream 1.0kb upstream 3079 true Scaffold1078: 36978-40056 Capsella grandiflora
Cagra.1078s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1078: 39057-40056 Capsella grandiflora
Cagra.1078s0012 1.0kb downstream 1.0kb downstream 3079 true Scaffold1078: 35978-39056 Capsella grandiflora
Cagra.1078s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1078: 35978-36977 Capsella grandiflora
Cagra.1078s0012 2.0kb upstream 2.0kb upstream 4079 true Scaffold1078: 36978-41056 Capsella grandiflora
Cagra.1078s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1078: 39057-41056 Capsella grandiflora
Cagra.1078s0012 2.0kb downstream 2.0kb downstream 4079 true Scaffold1078: 34978-39056 Capsella grandiflora
Cagra.1078s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1078: 34978-36977 Capsella grandiflora
Cagra.1078s0012 5.0kb upstream 5.0kb upstream 7079 true Scaffold1078: 36978-44056 Capsella grandiflora
Cagra.1078s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1078: 39057-44056 Capsella grandiflora
Cagra.1078s0012 5.0kb downstream 5.0kb downstream 7079 true Scaffold1078: 31978-39056 Capsella grandiflora
Cagra.1078s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1078: 31978-36977 Capsella grandiflora
Cagra.1078s0012 10.0kb upstream 10.0kb upstream 12079 true Scaffold1078: 36978-49056 Capsella grandiflora
Cagra.1078s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1078: 39057-49056 Capsella grandiflora
Cagra.1078s0012 10.0kb downstream 10.0kb downstream 12079 true Scaffold1078: 26978-39056 Capsella grandiflora
Cagra.1078s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1078: 26978-36977 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374554 5261 Brassicaceae View MSA
123836954 5264 Brassicales-Malvales View MSA
124322229 5266 SBM View MSA
124242133 5268 Malvidae View MSA
124071110 5270 Rosid View MSA
123750874 5271 Pentapetalae View MSA
122796085 5272 Eudicot View MSA
122045103 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain