Gene : Cagra.1036s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  30
Name:  ? Cagra.1036s0030 Secondary Identifier:  ? PAC:28903718
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0030 0.5kb upstream 0.5kb upstream 2890 true Scaffold1036: 99510-102399 Capsella grandiflora
Cagra.1036s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 99510-100009 Capsella grandiflora
Cagra.1036s0030 0.5kb downstream 0.5kb downstream 2890 true Scaffold1036: 100010-102899 Capsella grandiflora
Cagra.1036s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 102400-102899 Capsella grandiflora
Cagra.1036s0030 1.0kb upstream 1.0kb upstream 3390 true Scaffold1036: 99010-102399 Capsella grandiflora
Cagra.1036s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 99010-100009 Capsella grandiflora
Cagra.1036s0030 1.0kb downstream 1.0kb downstream 3390 true Scaffold1036: 100010-103399 Capsella grandiflora
Cagra.1036s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 102400-103399 Capsella grandiflora
Cagra.1036s0030 2.0kb upstream 2.0kb upstream 4390 true Scaffold1036: 98010-102399 Capsella grandiflora
Cagra.1036s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 98010-100009 Capsella grandiflora
Cagra.1036s0030 2.0kb downstream 2.0kb downstream 4390 true Scaffold1036: 100010-104399 Capsella grandiflora
Cagra.1036s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 102400-104399 Capsella grandiflora
Cagra.1036s0030 5.0kb upstream 5.0kb upstream 7390 true Scaffold1036: 95010-102399 Capsella grandiflora
Cagra.1036s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 95010-100009 Capsella grandiflora
Cagra.1036s0030 5.0kb downstream 5.0kb downstream 7390 true Scaffold1036: 100010-107399 Capsella grandiflora
Cagra.1036s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 102400-107399 Capsella grandiflora
Cagra.1036s0030 10.0kb upstream 10.0kb upstream 12390 true Scaffold1036: 90010-102399 Capsella grandiflora
Cagra.1036s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 90010-100009 Capsella grandiflora
Cagra.1036s0030 10.0kb downstream 10.0kb downstream 12390 true Scaffold1036: 100010-112399 Capsella grandiflora
Cagra.1036s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1036: 102400-112399 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373182 5261 Brassicaceae View MSA
123835527 5264 Brassicales-Malvales View MSA
124340631 5266 SBM View MSA
124244574 5268 Malvidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain