Gene : Cagra.1036s0048 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11743//PTHR11743:SF31 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL Genomic Order:  48
Name:  ? Cagra.1036s0048 Secondary Identifier:  ? PAC:28903704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0048 0.5kb upstream 0.5kb upstream 1813 true Scaffold1036: 168770-170582 Capsella grandiflora
Cagra.1036s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 168770-169269 Capsella grandiflora
Cagra.1036s0048 0.5kb downstream 0.5kb downstream 1813 true Scaffold1036: 169270-171082 Capsella grandiflora
Cagra.1036s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 170583-171082 Capsella grandiflora
Cagra.1036s0048 1.0kb upstream 1.0kb upstream 2313 true Scaffold1036: 168270-170582 Capsella grandiflora
Cagra.1036s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 168270-169269 Capsella grandiflora
Cagra.1036s0048 1.0kb downstream 1.0kb downstream 2313 true Scaffold1036: 169270-171582 Capsella grandiflora
Cagra.1036s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 170583-171582 Capsella grandiflora
Cagra.1036s0048 2.0kb upstream 2.0kb upstream 3313 true Scaffold1036: 167270-170582 Capsella grandiflora
Cagra.1036s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 167270-169269 Capsella grandiflora
Cagra.1036s0048 2.0kb downstream 2.0kb downstream 3313 true Scaffold1036: 169270-172582 Capsella grandiflora
Cagra.1036s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 170583-172582 Capsella grandiflora
Cagra.1036s0048 5.0kb upstream 5.0kb upstream 6313 true Scaffold1036: 164270-170582 Capsella grandiflora
Cagra.1036s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 164270-169269 Capsella grandiflora
Cagra.1036s0048 5.0kb downstream 5.0kb downstream 6313 true Scaffold1036: 169270-175582 Capsella grandiflora
Cagra.1036s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 170583-175582 Capsella grandiflora
Cagra.1036s0048 10.0kb upstream 10.0kb upstream 11313 true Scaffold1036: 159270-170582 Capsella grandiflora
Cagra.1036s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 159270-169269 Capsella grandiflora
Cagra.1036s0048 10.0kb downstream 10.0kb downstream 11313 true Scaffold1036: 169270-180582 Capsella grandiflora
Cagra.1036s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold1036: 170583-180582 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360432 5261 Brassicaceae View MSA
123797953 5264 Brassicales-Malvales View MSA
124350372 5266 SBM View MSA
124243906 5268 Malvidae View MSA
124071334 5270 Rosid View MSA
123743452 5271 Pentapetalae View MSA
122795321 5272 Eudicot View MSA
122042398 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain