Gene : Cagra.1036s0074 C. grandiflora v1.1
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  74
Name:  ? Cagra.1036s0074 Secondary Identifier:  ? PAC:28903725
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARG-PRO-PWY Capsella grandiflora pathologic  
Cgrandiflora PROSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3341 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0074 0.5kb upstream 0.5kb upstream 1674 true Scaffold1036: 264429-266102 Capsella grandiflora
Cagra.1036s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 264429-264928 Capsella grandiflora
Cagra.1036s0074 0.5kb downstream 0.5kb downstream 1674 true Scaffold1036: 264929-266602 Capsella grandiflora
Cagra.1036s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 266103-266602 Capsella grandiflora
Cagra.1036s0074 1.0kb upstream 1.0kb upstream 2174 true Scaffold1036: 263929-266102 Capsella grandiflora
Cagra.1036s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 263929-264928 Capsella grandiflora
Cagra.1036s0074 1.0kb downstream 1.0kb downstream 2174 true Scaffold1036: 264929-267102 Capsella grandiflora
Cagra.1036s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 266103-267102 Capsella grandiflora
Cagra.1036s0074 2.0kb upstream 2.0kb upstream 3174 true Scaffold1036: 262929-266102 Capsella grandiflora
Cagra.1036s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 262929-264928 Capsella grandiflora
Cagra.1036s0074 2.0kb downstream 2.0kb downstream 3174 true Scaffold1036: 264929-268102 Capsella grandiflora
Cagra.1036s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 266103-268102 Capsella grandiflora
Cagra.1036s0074 5.0kb upstream 5.0kb upstream 6174 true Scaffold1036: 259929-266102 Capsella grandiflora
Cagra.1036s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 259929-264928 Capsella grandiflora
Cagra.1036s0074 5.0kb downstream 5.0kb downstream 6174 true Scaffold1036: 264929-271102 Capsella grandiflora
Cagra.1036s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 266103-271102 Capsella grandiflora
Cagra.1036s0074 10.0kb upstream 10.0kb upstream 11174 true Scaffold1036: 254929-266102 Capsella grandiflora
Cagra.1036s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 254929-264928 Capsella grandiflora
Cagra.1036s0074 10.0kb downstream 10.0kb downstream 10472 true Scaffold1036: 264929-275400 Capsella grandiflora
Cagra.1036s0074 10.0kb downstream 10.0kb downstream 9298 false Scaffold1036: 266103-275400 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332261 5261 Brassicaceae Singleton cluster - no MSA
123837658 5264 Brassicales-Malvales View MSA
124337864 5266 SBM View MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain