Gene : Cagra.1043s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10133:SF22 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  9
Name:  ? Cagra.1043s0009 Secondary Identifier:  ? PAC:28897713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0009 0.5kb upstream 0.5kb upstream 5111 true Scaffold1043: 19425-24535 Capsella grandiflora
Cagra.1043s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 24036-24535 Capsella grandiflora
Cagra.1043s0009 0.5kb downstream 0.5kb downstream 5111 true Scaffold1043: 18925-24035 Capsella grandiflora
Cagra.1043s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 18925-19424 Capsella grandiflora
Cagra.1043s0009 1.0kb upstream 1.0kb upstream 5611 true Scaffold1043: 19425-25035 Capsella grandiflora
Cagra.1043s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 24036-25035 Capsella grandiflora
Cagra.1043s0009 1.0kb downstream 1.0kb downstream 5611 true Scaffold1043: 18425-24035 Capsella grandiflora
Cagra.1043s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 18425-19424 Capsella grandiflora
Cagra.1043s0009 2.0kb upstream 2.0kb upstream 6611 true Scaffold1043: 19425-26035 Capsella grandiflora
Cagra.1043s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 24036-26035 Capsella grandiflora
Cagra.1043s0009 2.0kb downstream 2.0kb downstream 6611 true Scaffold1043: 17425-24035 Capsella grandiflora
Cagra.1043s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 17425-19424 Capsella grandiflora
Cagra.1043s0009 5.0kb upstream 5.0kb upstream 9611 true Scaffold1043: 19425-29035 Capsella grandiflora
Cagra.1043s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 24036-29035 Capsella grandiflora
Cagra.1043s0009 5.0kb downstream 5.0kb downstream 9611 true Scaffold1043: 14425-24035 Capsella grandiflora
Cagra.1043s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 14425-19424 Capsella grandiflora
Cagra.1043s0009 10.0kb upstream 10.0kb upstream 14611 true Scaffold1043: 19425-34035 Capsella grandiflora
Cagra.1043s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 24036-34035 Capsella grandiflora
Cagra.1043s0009 10.0kb downstream 10.0kb downstream 14611 true Scaffold1043: 9425-24035 Capsella grandiflora
Cagra.1043s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 9425-19424 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368111 5261 Brassicaceae View MSA
123829307 5264 Brassicales-Malvales View MSA
124321589 5266 SBM View MSA
124244620 5268 Malvidae View MSA
124063709 5270 Rosid View MSA
123739108 5271 Pentapetalae View MSA
122787577 5272 Eudicot View MSA
122042646 5273 Angiosperm View MSA
121346899 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain