Gene : Cagra.1043s0015 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  15
Name:  ? Cagra.1043s0015 Secondary Identifier:  ? PAC:28897721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0015 0.5kb upstream 0.5kb upstream 2040 true Scaffold1043: 32671-34710 Capsella grandiflora
Cagra.1043s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 32671-33170 Capsella grandiflora
Cagra.1043s0015 0.5kb downstream 0.5kb downstream 2040 true Scaffold1043: 33171-35210 Capsella grandiflora
Cagra.1043s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 34711-35210 Capsella grandiflora
Cagra.1043s0015 1.0kb upstream 1.0kb upstream 2540 true Scaffold1043: 32171-34710 Capsella grandiflora
Cagra.1043s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 32171-33170 Capsella grandiflora
Cagra.1043s0015 1.0kb downstream 1.0kb downstream 2540 true Scaffold1043: 33171-35710 Capsella grandiflora
Cagra.1043s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 34711-35710 Capsella grandiflora
Cagra.1043s0015 2.0kb upstream 2.0kb upstream 3540 true Scaffold1043: 31171-34710 Capsella grandiflora
Cagra.1043s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 31171-33170 Capsella grandiflora
Cagra.1043s0015 2.0kb downstream 2.0kb downstream 3540 true Scaffold1043: 33171-36710 Capsella grandiflora
Cagra.1043s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 34711-36710 Capsella grandiflora
Cagra.1043s0015 5.0kb upstream 5.0kb upstream 6540 true Scaffold1043: 28171-34710 Capsella grandiflora
Cagra.1043s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 28171-33170 Capsella grandiflora
Cagra.1043s0015 5.0kb downstream 5.0kb downstream 6540 true Scaffold1043: 33171-39710 Capsella grandiflora
Cagra.1043s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 34711-39710 Capsella grandiflora
Cagra.1043s0015 10.0kb upstream 10.0kb upstream 11540 true Scaffold1043: 23171-34710 Capsella grandiflora
Cagra.1043s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 23171-33170 Capsella grandiflora
Cagra.1043s0015 10.0kb downstream 10.0kb downstream 11540 true Scaffold1043: 33171-44710 Capsella grandiflora
Cagra.1043s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 34711-44710 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367448 5261 Brassicaceae View MSA
123799354 5264 Brassicales-Malvales View MSA
124296881 5266 SBM View MSA
124148914 5268 Malvidae View MSA
124070072 5270 Rosid View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain