Gene : Cagra.1043s0019 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10015:SF186 - HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED Genomic Order:  19
Name:  ? Cagra.1043s0019 Secondary Identifier:  ? PAC:28897722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0019 0.5kb upstream 0.5kb upstream 1896 true Scaffold1043: 51980-53875 Capsella grandiflora
Cagra.1043s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 53376-53875 Capsella grandiflora
Cagra.1043s0019 0.5kb downstream 0.5kb downstream 1896 true Scaffold1043: 51480-53375 Capsella grandiflora
Cagra.1043s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 51480-51979 Capsella grandiflora
Cagra.1043s0019 1.0kb upstream 1.0kb upstream 2396 true Scaffold1043: 51980-54375 Capsella grandiflora
Cagra.1043s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 53376-54375 Capsella grandiflora
Cagra.1043s0019 1.0kb downstream 1.0kb downstream 2396 true Scaffold1043: 50980-53375 Capsella grandiflora
Cagra.1043s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 50980-51979 Capsella grandiflora
Cagra.1043s0019 2.0kb upstream 2.0kb upstream 3396 true Scaffold1043: 51980-55375 Capsella grandiflora
Cagra.1043s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 53376-55375 Capsella grandiflora
Cagra.1043s0019 2.0kb downstream 2.0kb downstream 3396 true Scaffold1043: 49980-53375 Capsella grandiflora
Cagra.1043s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 49980-51979 Capsella grandiflora
Cagra.1043s0019 5.0kb upstream 5.0kb upstream 6396 true Scaffold1043: 51980-58375 Capsella grandiflora
Cagra.1043s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 53376-58375 Capsella grandiflora
Cagra.1043s0019 5.0kb downstream 5.0kb downstream 6396 true Scaffold1043: 46980-53375 Capsella grandiflora
Cagra.1043s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 46980-51979 Capsella grandiflora
Cagra.1043s0019 10.0kb upstream 10.0kb upstream 11396 true Scaffold1043: 51980-63375 Capsella grandiflora
Cagra.1043s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 53376-63375 Capsella grandiflora
Cagra.1043s0019 10.0kb downstream 10.0kb downstream 11396 true Scaffold1043: 41980-53375 Capsella grandiflora
Cagra.1043s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 41980-51979 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365017 5261 Brassicaceae View MSA
123838243 5264 Brassicales-Malvales View MSA
124348589 5266 SBM View MSA
124254362 5268 Malvidae View MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain