Gene : Cagra.1013s0030 C. grandiflora v1.1
Defline:  (1 of 5) PTHR11909:SF154 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  30
Name:  ? Cagra.1013s0030 Secondary Identifier:  ? PAC:28916228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1013s0030 0.5kb upstream 0.5kb upstream 5157 true Scaffold1013: 100567-105723 Capsella grandiflora
Cagra.1013s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1013: 105224-105723 Capsella grandiflora
Cagra.1013s0030 0.5kb downstream 0.5kb downstream 5157 true Scaffold1013: 100067-105223 Capsella grandiflora
Cagra.1013s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1013: 100067-100566 Capsella grandiflora
Cagra.1013s0030 1.0kb upstream 1.0kb upstream 5657 true Scaffold1013: 100567-106223 Capsella grandiflora
Cagra.1013s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1013: 105224-106223 Capsella grandiflora
Cagra.1013s0030 1.0kb downstream 1.0kb downstream 5657 true Scaffold1013: 99567-105223 Capsella grandiflora
Cagra.1013s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1013: 99567-100566 Capsella grandiflora
Cagra.1013s0030 2.0kb upstream 2.0kb upstream 6657 true Scaffold1013: 100567-107223 Capsella grandiflora
Cagra.1013s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1013: 105224-107223 Capsella grandiflora
Cagra.1013s0030 2.0kb downstream 2.0kb downstream 6657 true Scaffold1013: 98567-105223 Capsella grandiflora
Cagra.1013s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1013: 98567-100566 Capsella grandiflora
Cagra.1013s0030 5.0kb upstream 5.0kb upstream 9657 true Scaffold1013: 100567-110223 Capsella grandiflora
Cagra.1013s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1013: 105224-110223 Capsella grandiflora
Cagra.1013s0030 5.0kb downstream 5.0kb downstream 9657 true Scaffold1013: 95567-105223 Capsella grandiflora
Cagra.1013s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1013: 95567-100566 Capsella grandiflora
Cagra.1013s0030 10.0kb upstream 10.0kb upstream 14657 true Scaffold1013: 100567-115223 Capsella grandiflora
Cagra.1013s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1013: 105224-115223 Capsella grandiflora
Cagra.1013s0030 10.0kb downstream 10.0kb downstream 14657 true Scaffold1013: 90567-105223 Capsella grandiflora
Cagra.1013s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1013: 90567-100566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364086 5261 Brassicaceae View MSA
123839505 5264 Brassicales-Malvales View MSA
124343657 5266 SBM View MSA
124243841 5268 Malvidae View MSA
124070387 5270 Rosid View MSA
123747498 5271 Pentapetalae View MSA
122795191 5272 Eudicot View MSA
122046132 5273 Angiosperm View MSA
121344009 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain