Gene : Cagra.1013s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  36
Name:  ? Cagra.1013s0036 Secondary Identifier:  ? PAC:28916210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1013s0036 0.5kb upstream 0.5kb upstream 3341 true Scaffold1013: 125590-128930 Capsella grandiflora
Cagra.1013s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1013: 128431-128930 Capsella grandiflora
Cagra.1013s0036 0.5kb downstream 0.5kb downstream 3341 true Scaffold1013: 125090-128430 Capsella grandiflora
Cagra.1013s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1013: 125090-125589 Capsella grandiflora
Cagra.1013s0036 1.0kb upstream 1.0kb upstream 3841 true Scaffold1013: 125590-129430 Capsella grandiflora
Cagra.1013s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1013: 128431-129430 Capsella grandiflora
Cagra.1013s0036 1.0kb downstream 1.0kb downstream 3841 true Scaffold1013: 124590-128430 Capsella grandiflora
Cagra.1013s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1013: 124590-125589 Capsella grandiflora
Cagra.1013s0036 2.0kb upstream 2.0kb upstream 4841 true Scaffold1013: 125590-130430 Capsella grandiflora
Cagra.1013s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1013: 128431-130430 Capsella grandiflora
Cagra.1013s0036 2.0kb downstream 2.0kb downstream 4841 true Scaffold1013: 123590-128430 Capsella grandiflora
Cagra.1013s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1013: 123590-125589 Capsella grandiflora
Cagra.1013s0036 5.0kb upstream 5.0kb upstream 7841 true Scaffold1013: 125590-133430 Capsella grandiflora
Cagra.1013s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1013: 128431-133430 Capsella grandiflora
Cagra.1013s0036 5.0kb downstream 5.0kb downstream 7841 true Scaffold1013: 120590-128430 Capsella grandiflora
Cagra.1013s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1013: 120590-125589 Capsella grandiflora
Cagra.1013s0036 10.0kb upstream 10.0kb upstream 12841 true Scaffold1013: 125590-138430 Capsella grandiflora
Cagra.1013s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1013: 128431-138430 Capsella grandiflora
Cagra.1013s0036 10.0kb downstream 10.0kb downstream 12841 true Scaffold1013: 115590-128430 Capsella grandiflora
Cagra.1013s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1013: 115590-125589 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375754 5261 Brassicaceae View MSA
123841384 5264 Brassicales-Malvales View MSA
124346617 5266 SBM View MSA
124252026 5268 Malvidae View MSA
124061716 5270 Rosid View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain