Gene : Cagra.1013s0065 C. grandiflora v1.1
Defline:  (1 of 4) 2.6.1.2 - Alanine transaminase / Glutamic--pyruvic transaminase Genomic Order:  65
Name:  ? Cagra.1013s0065 Secondary Identifier:  ? PAC:28916239
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ALANINE-DEG3-PWY Capsella grandiflora pathologic  
Cgrandiflora ALANINE-SYN2-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1013s0065 0.5kb upstream 0.5kb upstream 4035 true Scaffold1013: 249265-253299 Capsella grandiflora
Cagra.1013s0065 0.5kb upstream 0.5kb upstream 500 false Scaffold1013: 252800-253299 Capsella grandiflora
Cagra.1013s0065 0.5kb downstream 0.5kb downstream 4035 true Scaffold1013: 248765-252799 Capsella grandiflora
Cagra.1013s0065 0.5kb downstream 0.5kb downstream 500 false Scaffold1013: 248765-249264 Capsella grandiflora
Cagra.1013s0065 1.0kb upstream 1.0kb upstream 4535 true Scaffold1013: 249265-253799 Capsella grandiflora
Cagra.1013s0065 1.0kb upstream 1.0kb upstream 1000 false Scaffold1013: 252800-253799 Capsella grandiflora
Cagra.1013s0065 1.0kb downstream 1.0kb downstream 4535 true Scaffold1013: 248265-252799 Capsella grandiflora
Cagra.1013s0065 1.0kb downstream 1.0kb downstream 1000 false Scaffold1013: 248265-249264 Capsella grandiflora
Cagra.1013s0065 2.0kb upstream 2.0kb upstream 5535 true Scaffold1013: 249265-254799 Capsella grandiflora
Cagra.1013s0065 2.0kb upstream 2.0kb upstream 2000 false Scaffold1013: 252800-254799 Capsella grandiflora
Cagra.1013s0065 2.0kb downstream 2.0kb downstream 5535 true Scaffold1013: 247265-252799 Capsella grandiflora
Cagra.1013s0065 2.0kb downstream 2.0kb downstream 2000 false Scaffold1013: 247265-249264 Capsella grandiflora
Cagra.1013s0065 5.0kb upstream 5.0kb upstream 8535 true Scaffold1013: 249265-257799 Capsella grandiflora
Cagra.1013s0065 5.0kb upstream 5.0kb upstream 5000 false Scaffold1013: 252800-257799 Capsella grandiflora
Cagra.1013s0065 5.0kb downstream 5.0kb downstream 8535 true Scaffold1013: 244265-252799 Capsella grandiflora
Cagra.1013s0065 5.0kb downstream 5.0kb downstream 5000 false Scaffold1013: 244265-249264 Capsella grandiflora
Cagra.1013s0065 10.0kb upstream 10.0kb upstream 13535 true Scaffold1013: 249265-262799 Capsella grandiflora
Cagra.1013s0065 10.0kb upstream 10.0kb upstream 10000 false Scaffold1013: 252800-262799 Capsella grandiflora
Cagra.1013s0065 10.0kb downstream 10.0kb downstream 13535 true Scaffold1013: 239265-252799 Capsella grandiflora
Cagra.1013s0065 10.0kb downstream 10.0kb downstream 10000 false Scaffold1013: 239265-249264 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375790 5261 Brassicaceae View MSA
123836852 5264 Brassicales-Malvales View MSA
124344699 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain