Gene : Cagra.1031s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11119:SF29 - NUCLEOBASE-ASCORBATE TRANSPORTER 3 Genomic Order:  1
Name:  ? Cagra.1031s0001 Secondary Identifier:  ? PAC:28914847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1031s0001 0.5kb upstream 0.5kb upstream 3429 true Scaffold1031: 5481-8909 Capsella grandiflora
Cagra.1031s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1031: 8410-8909 Capsella grandiflora
Cagra.1031s0001 0.5kb downstream 0.5kb downstream 3429 true Scaffold1031: 4981-8409 Capsella grandiflora
Cagra.1031s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1031: 4981-5480 Capsella grandiflora
Cagra.1031s0001 1.0kb upstream 1.0kb upstream 3929 true Scaffold1031: 5481-9409 Capsella grandiflora
Cagra.1031s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1031: 8410-9409 Capsella grandiflora
Cagra.1031s0001 1.0kb downstream 1.0kb downstream 3929 true Scaffold1031: 4481-8409 Capsella grandiflora
Cagra.1031s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1031: 4481-5480 Capsella grandiflora
Cagra.1031s0001 2.0kb upstream 2.0kb upstream 4929 true Scaffold1031: 5481-10409 Capsella grandiflora
Cagra.1031s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1031: 8410-10409 Capsella grandiflora
Cagra.1031s0001 2.0kb downstream 2.0kb downstream 4929 true Scaffold1031: 3481-8409 Capsella grandiflora
Cagra.1031s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1031: 3481-5480 Capsella grandiflora
Cagra.1031s0001 5.0kb upstream 5.0kb upstream 7929 true Scaffold1031: 5481-13409 Capsella grandiflora
Cagra.1031s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1031: 8410-13409 Capsella grandiflora
Cagra.1031s0001 5.0kb downstream 5.0kb downstream 7929 true Scaffold1031: 481-8409 Capsella grandiflora
Cagra.1031s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1031: 481-5480 Capsella grandiflora
Cagra.1031s0001 10.0kb upstream 10.0kb upstream 10997 true Scaffold1031: 5481-16477 Capsella grandiflora
Cagra.1031s0001 10.0kb upstream 10.0kb upstream 8068 false Scaffold1031: 8410-16477 Capsella grandiflora
Cagra.1031s0001 10.0kb downstream 10.0kb downstream 8409 true Scaffold1031: 1-8409 Capsella grandiflora
Cagra.1031s0001 10.0kb downstream 10.0kb downstream 5480 false Scaffold1031: 1-5480 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332252 5261 Brassicaceae Singleton cluster - no MSA
123837601 5264 Brassicales-Malvales View MSA
124336610 5266 SBM View MSA
124249616 5268 Malvidae View MSA
124063260 5270 Rosid View MSA
123737835 5271 Pentapetalae View MSA
122788560 5272 Eudicot View MSA
122048256 5273 Angiosperm View MSA
121352133 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain