Gene : Cagra.1036s0007 C. grandiflora v1.1
Defline:  (1 of 5) PTHR11374 - UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE Genomic Order:  7
Name:  ? Cagra.1036s0007 Secondary Identifier:  ? PAC:28903669
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4821 Capsella grandiflora pathologic  
Cgrandiflora PWY-7346 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0007 0.5kb upstream 0.5kb upstream 2822 true Scaffold1036: 24826-27647 Capsella grandiflora
Cagra.1036s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 24826-25325 Capsella grandiflora
Cagra.1036s0007 0.5kb downstream 0.5kb downstream 2822 true Scaffold1036: 25326-28147 Capsella grandiflora
Cagra.1036s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 27648-28147 Capsella grandiflora
Cagra.1036s0007 1.0kb upstream 1.0kb upstream 3322 true Scaffold1036: 24326-27647 Capsella grandiflora
Cagra.1036s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 24326-25325 Capsella grandiflora
Cagra.1036s0007 1.0kb downstream 1.0kb downstream 3322 true Scaffold1036: 25326-28647 Capsella grandiflora
Cagra.1036s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 27648-28647 Capsella grandiflora
Cagra.1036s0007 2.0kb upstream 2.0kb upstream 4322 true Scaffold1036: 23326-27647 Capsella grandiflora
Cagra.1036s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 23326-25325 Capsella grandiflora
Cagra.1036s0007 2.0kb downstream 2.0kb downstream 4322 true Scaffold1036: 25326-29647 Capsella grandiflora
Cagra.1036s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 27648-29647 Capsella grandiflora
Cagra.1036s0007 5.0kb upstream 5.0kb upstream 7322 true Scaffold1036: 20326-27647 Capsella grandiflora
Cagra.1036s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 20326-25325 Capsella grandiflora
Cagra.1036s0007 5.0kb downstream 5.0kb downstream 7322 true Scaffold1036: 25326-32647 Capsella grandiflora
Cagra.1036s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 27648-32647 Capsella grandiflora
Cagra.1036s0007 10.0kb upstream 10.0kb upstream 12322 true Scaffold1036: 15326-27647 Capsella grandiflora
Cagra.1036s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 15326-25325 Capsella grandiflora
Cagra.1036s0007 10.0kb downstream 10.0kb downstream 12322 true Scaffold1036: 25326-37647 Capsella grandiflora
Cagra.1036s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1036: 27648-37647 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376310 5261 Brassicaceae View MSA
123840319 5264 Brassicales-Malvales View MSA
124349815 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain