Gene : Cagra.1036s0006 C. grandiflora v1.1
Defline:  (1 of 4) KOG0502//KOG0508//KOG4412 - Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) // Ankyrin repeat protein // 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  6
Name:  ? Cagra.1036s0006 Secondary Identifier:  ? PAC:28903733
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0006 0.5kb upstream 0.5kb upstream 2387 true Scaffold1036: 21887-24273 Capsella grandiflora
Cagra.1036s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 21887-22386 Capsella grandiflora
Cagra.1036s0006 0.5kb downstream 0.5kb downstream 2387 true Scaffold1036: 22387-24773 Capsella grandiflora
Cagra.1036s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 24274-24773 Capsella grandiflora
Cagra.1036s0006 1.0kb upstream 1.0kb upstream 2887 true Scaffold1036: 21387-24273 Capsella grandiflora
Cagra.1036s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 21387-22386 Capsella grandiflora
Cagra.1036s0006 1.0kb downstream 1.0kb downstream 2887 true Scaffold1036: 22387-25273 Capsella grandiflora
Cagra.1036s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 24274-25273 Capsella grandiflora
Cagra.1036s0006 2.0kb upstream 2.0kb upstream 3887 true Scaffold1036: 20387-24273 Capsella grandiflora
Cagra.1036s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 20387-22386 Capsella grandiflora
Cagra.1036s0006 2.0kb downstream 2.0kb downstream 3887 true Scaffold1036: 22387-26273 Capsella grandiflora
Cagra.1036s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 24274-26273 Capsella grandiflora
Cagra.1036s0006 5.0kb upstream 5.0kb upstream 6887 true Scaffold1036: 17387-24273 Capsella grandiflora
Cagra.1036s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 17387-22386 Capsella grandiflora
Cagra.1036s0006 5.0kb downstream 5.0kb downstream 6887 true Scaffold1036: 22387-29273 Capsella grandiflora
Cagra.1036s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 24274-29273 Capsella grandiflora
Cagra.1036s0006 10.0kb upstream 10.0kb upstream 11887 true Scaffold1036: 12387-24273 Capsella grandiflora
Cagra.1036s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 12387-22386 Capsella grandiflora
Cagra.1036s0006 10.0kb downstream 10.0kb downstream 11887 true Scaffold1036: 22387-34273 Capsella grandiflora
Cagra.1036s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1036: 24274-34273 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364125 5261 Brassicaceae View MSA
123839741 5264 Brassicales-Malvales View MSA
124343908 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain