Gene : Cagra.1329s0003 C. grandiflora v1.1
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  3
Name:  ? Cagra.1329s0003 Secondary Identifier:  ? PAC:28896752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1329s0003 0.5kb upstream 0.5kb upstream 3143 true Scaffold1329: 12831-15973 Capsella grandiflora
Cagra.1329s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1329: 12831-13330 Capsella grandiflora
Cagra.1329s0003 0.5kb downstream 0.5kb downstream 3143 true Scaffold1329: 13331-16473 Capsella grandiflora
Cagra.1329s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1329: 15974-16473 Capsella grandiflora
Cagra.1329s0003 1.0kb upstream 1.0kb upstream 3643 true Scaffold1329: 12331-15973 Capsella grandiflora
Cagra.1329s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1329: 12331-13330 Capsella grandiflora
Cagra.1329s0003 1.0kb downstream 1.0kb downstream 3643 true Scaffold1329: 13331-16973 Capsella grandiflora
Cagra.1329s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1329: 15974-16973 Capsella grandiflora
Cagra.1329s0003 2.0kb upstream 2.0kb upstream 4643 true Scaffold1329: 11331-15973 Capsella grandiflora
Cagra.1329s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1329: 11331-13330 Capsella grandiflora
Cagra.1329s0003 2.0kb downstream 2.0kb downstream 4643 true Scaffold1329: 13331-17973 Capsella grandiflora
Cagra.1329s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1329: 15974-17973 Capsella grandiflora
Cagra.1329s0003 5.0kb upstream 5.0kb upstream 7643 true Scaffold1329: 8331-15973 Capsella grandiflora
Cagra.1329s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1329: 8331-13330 Capsella grandiflora
Cagra.1329s0003 5.0kb downstream 5.0kb downstream 7643 true Scaffold1329: 13331-20973 Capsella grandiflora
Cagra.1329s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1329: 15974-20973 Capsella grandiflora
Cagra.1329s0003 10.0kb upstream 10.0kb upstream 12643 true Scaffold1329: 3331-15973 Capsella grandiflora
Cagra.1329s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1329: 3331-13330 Capsella grandiflora
Cagra.1329s0003 10.0kb downstream 10.0kb downstream 12643 true Scaffold1329: 13331-25973 Capsella grandiflora
Cagra.1329s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1329: 15974-25973 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361085 5261 Brassicaceae View MSA
123833127 5264 Brassicales-Malvales View MSA
124321848 5266 SBM View MSA
124247897 5268 Malvidae View MSA
124070271 5270 Rosid View MSA
123749470 5271 Pentapetalae View MSA
122796901 5272 Eudicot View MSA
122044629 5273 Angiosperm View MSA
121349221 5274 Embryophyte View MSA
123381221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain