Gene : Cagra.1336s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10806 - SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 Genomic Order:  6
Name:  ? Cagra.1336s0006 Secondary Identifier:  ? PAC:28895980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0006 0.5kb upstream 0.5kb upstream 2123 true Scaffold1336: 18217-20339 Capsella grandiflora
Cagra.1336s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 18217-18716 Capsella grandiflora
Cagra.1336s0006 0.5kb downstream 0.5kb downstream 2123 true Scaffold1336: 18717-20839 Capsella grandiflora
Cagra.1336s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 20340-20839 Capsella grandiflora
Cagra.1336s0006 1.0kb upstream 1.0kb upstream 2623 true Scaffold1336: 17717-20339 Capsella grandiflora
Cagra.1336s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 17717-18716 Capsella grandiflora
Cagra.1336s0006 1.0kb downstream 1.0kb downstream 2623 true Scaffold1336: 18717-21339 Capsella grandiflora
Cagra.1336s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 20340-21339 Capsella grandiflora
Cagra.1336s0006 2.0kb upstream 2.0kb upstream 3623 true Scaffold1336: 16717-20339 Capsella grandiflora
Cagra.1336s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 16717-18716 Capsella grandiflora
Cagra.1336s0006 2.0kb downstream 2.0kb downstream 3623 true Scaffold1336: 18717-22339 Capsella grandiflora
Cagra.1336s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 20340-22339 Capsella grandiflora
Cagra.1336s0006 5.0kb upstream 5.0kb upstream 6623 true Scaffold1336: 13717-20339 Capsella grandiflora
Cagra.1336s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 13717-18716 Capsella grandiflora
Cagra.1336s0006 5.0kb downstream 5.0kb downstream 6623 true Scaffold1336: 18717-25339 Capsella grandiflora
Cagra.1336s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 20340-25339 Capsella grandiflora
Cagra.1336s0006 10.0kb upstream 10.0kb upstream 11623 true Scaffold1336: 8717-20339 Capsella grandiflora
Cagra.1336s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 8717-18716 Capsella grandiflora
Cagra.1336s0006 10.0kb downstream 10.0kb downstream 11623 true Scaffold1336: 18717-30339 Capsella grandiflora
Cagra.1336s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1336: 20340-30339 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379705 5261 Brassicaceae View MSA
123839617 5264 Brassicales-Malvales View MSA
124341362 5266 SBM View MSA
124248666 5268 Malvidae View MSA
124074167 5270 Rosid View MSA
123753125 5271 Pentapetalae View MSA
122796679 5272 Eudicot View MSA
122042298 5273 Angiosperm View MSA
121346820 5274 Embryophyte View MSA
123423864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain