Gene : Cagra.1336s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10293:SF16 - GLUTAREDOXIN-RELATED PROTEIN 5, MITOCHONDRIAL Genomic Order:  11
Name:  ? Cagra.1336s0011 Secondary Identifier:  ? PAC:28895977
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0011 0.5kb upstream 0.5kb upstream 2170 true Scaffold1336: 34367-36536 Capsella grandiflora
Cagra.1336s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 34367-34866 Capsella grandiflora
Cagra.1336s0011 0.5kb downstream 0.5kb downstream 2170 true Scaffold1336: 34867-37036 Capsella grandiflora
Cagra.1336s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 36537-37036 Capsella grandiflora
Cagra.1336s0011 1.0kb upstream 1.0kb upstream 2670 true Scaffold1336: 33867-36536 Capsella grandiflora
Cagra.1336s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 33867-34866 Capsella grandiflora
Cagra.1336s0011 1.0kb downstream 1.0kb downstream 2670 true Scaffold1336: 34867-37536 Capsella grandiflora
Cagra.1336s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 36537-37536 Capsella grandiflora
Cagra.1336s0011 2.0kb upstream 2.0kb upstream 3670 true Scaffold1336: 32867-36536 Capsella grandiflora
Cagra.1336s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 32867-34866 Capsella grandiflora
Cagra.1336s0011 2.0kb downstream 2.0kb downstream 3670 true Scaffold1336: 34867-38536 Capsella grandiflora
Cagra.1336s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 36537-38536 Capsella grandiflora
Cagra.1336s0011 5.0kb upstream 5.0kb upstream 6670 true Scaffold1336: 29867-36536 Capsella grandiflora
Cagra.1336s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 29867-34866 Capsella grandiflora
Cagra.1336s0011 5.0kb downstream 5.0kb downstream 6670 true Scaffold1336: 34867-41536 Capsella grandiflora
Cagra.1336s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 36537-41536 Capsella grandiflora
Cagra.1336s0011 10.0kb upstream 10.0kb upstream 11670 true Scaffold1336: 24867-36536 Capsella grandiflora
Cagra.1336s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 24867-34866 Capsella grandiflora
Cagra.1336s0011 10.0kb downstream 10.0kb downstream 11670 true Scaffold1336: 34867-46536 Capsella grandiflora
Cagra.1336s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1336: 36537-46536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371662 5261 Brassicaceae View MSA
123834726 5264 Brassicales-Malvales View MSA
124341817 5266 SBM View MSA
124241991 5268 Malvidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain