Gene : Cagra.1336s0016 C. grandiflora v1.1
Defline:  (1 of 4) PTHR19877 - WD40 REPEAT PROTEIN Genomic Order:  16
Name:  ? Cagra.1336s0016 Secondary Identifier:  ? PAC:28895981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0016 0.5kb upstream 0.5kb upstream 2731 true Scaffold1336: 52552-55282 Capsella grandiflora
Cagra.1336s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 52552-53051 Capsella grandiflora
Cagra.1336s0016 0.5kb downstream 0.5kb downstream 2731 true Scaffold1336: 53052-55782 Capsella grandiflora
Cagra.1336s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 55283-55782 Capsella grandiflora
Cagra.1336s0016 1.0kb upstream 1.0kb upstream 3231 true Scaffold1336: 52052-55282 Capsella grandiflora
Cagra.1336s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 52052-53051 Capsella grandiflora
Cagra.1336s0016 1.0kb downstream 1.0kb downstream 3231 true Scaffold1336: 53052-56282 Capsella grandiflora
Cagra.1336s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 55283-56282 Capsella grandiflora
Cagra.1336s0016 2.0kb upstream 2.0kb upstream 4231 true Scaffold1336: 51052-55282 Capsella grandiflora
Cagra.1336s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 51052-53051 Capsella grandiflora
Cagra.1336s0016 2.0kb downstream 2.0kb downstream 4231 true Scaffold1336: 53052-57282 Capsella grandiflora
Cagra.1336s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 55283-57282 Capsella grandiflora
Cagra.1336s0016 5.0kb upstream 5.0kb upstream 7231 true Scaffold1336: 48052-55282 Capsella grandiflora
Cagra.1336s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 48052-53051 Capsella grandiflora
Cagra.1336s0016 5.0kb downstream 5.0kb downstream 7231 true Scaffold1336: 53052-60282 Capsella grandiflora
Cagra.1336s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 55283-60282 Capsella grandiflora
Cagra.1336s0016 10.0kb upstream 10.0kb upstream 12231 true Scaffold1336: 43052-55282 Capsella grandiflora
Cagra.1336s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 43052-53051 Capsella grandiflora
Cagra.1336s0016 10.0kb downstream 10.0kb downstream 12231 true Scaffold1336: 53052-65282 Capsella grandiflora
Cagra.1336s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1336: 55283-65282 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377196 5261 Brassicaceae View MSA
123837394 5264 Brassicales-Malvales View MSA
124348040 5266 SBM View MSA
124237650 5268 Malvidae View MSA
124065489 5270 Rosid View MSA
123747491 5271 Pentapetalae View MSA
122789179 5272 Eudicot View MSA
122051030 5273 Angiosperm View MSA
121344800 5274 Embryophyte View MSA
123428102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain