Gene : Cagra.1336s0015 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.99.13 - (6-4)DNA photolyase / DNA photolyase Genomic Order:  15
Name:  ? Cagra.1336s0015 Secondary Identifier:  ? PAC:28895984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0015 0.5kb upstream 0.5kb upstream 3741 true Scaffold1336: 49059-52799 Capsella grandiflora
Cagra.1336s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 49059-49558 Capsella grandiflora
Cagra.1336s0015 0.5kb downstream 0.5kb downstream 3741 true Scaffold1336: 49559-53299 Capsella grandiflora
Cagra.1336s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 52800-53299 Capsella grandiflora
Cagra.1336s0015 1.0kb upstream 1.0kb upstream 4241 true Scaffold1336: 48559-52799 Capsella grandiflora
Cagra.1336s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 48559-49558 Capsella grandiflora
Cagra.1336s0015 1.0kb downstream 1.0kb downstream 4241 true Scaffold1336: 49559-53799 Capsella grandiflora
Cagra.1336s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 52800-53799 Capsella grandiflora
Cagra.1336s0015 2.0kb upstream 2.0kb upstream 5241 true Scaffold1336: 47559-52799 Capsella grandiflora
Cagra.1336s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 47559-49558 Capsella grandiflora
Cagra.1336s0015 2.0kb downstream 2.0kb downstream 5241 true Scaffold1336: 49559-54799 Capsella grandiflora
Cagra.1336s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 52800-54799 Capsella grandiflora
Cagra.1336s0015 5.0kb upstream 5.0kb upstream 8241 true Scaffold1336: 44559-52799 Capsella grandiflora
Cagra.1336s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 44559-49558 Capsella grandiflora
Cagra.1336s0015 5.0kb downstream 5.0kb downstream 8241 true Scaffold1336: 49559-57799 Capsella grandiflora
Cagra.1336s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 52800-57799 Capsella grandiflora
Cagra.1336s0015 10.0kb upstream 10.0kb upstream 13241 true Scaffold1336: 39559-52799 Capsella grandiflora
Cagra.1336s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 39559-49558 Capsella grandiflora
Cagra.1336s0015 10.0kb downstream 10.0kb downstream 13241 true Scaffold1336: 49559-62799 Capsella grandiflora
Cagra.1336s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1336: 52800-62799 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368137 5261 Brassicaceae View MSA
123829838 5264 Brassicales-Malvales View MSA
124338473 5266 SBM View MSA
124242574 5268 Malvidae View MSA
124062043 5270 Rosid View MSA
123737581 5271 Pentapetalae View MSA
122791265 5272 Eudicot View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain