Gene : Cagra.1336s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11071:SF174 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC Genomic Order:  27
Name:  ? Cagra.1336s0027 Secondary Identifier:  ? PAC:28895985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0027 0.5kb upstream 0.5kb upstream 3433 true Scaffold1336: 87983-91415 Capsella grandiflora
Cagra.1336s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 87983-88482 Capsella grandiflora
Cagra.1336s0027 0.5kb downstream 0.5kb downstream 3433 true Scaffold1336: 88483-91915 Capsella grandiflora
Cagra.1336s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 91416-91915 Capsella grandiflora
Cagra.1336s0027 1.0kb upstream 1.0kb upstream 3933 true Scaffold1336: 87483-91415 Capsella grandiflora
Cagra.1336s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 87483-88482 Capsella grandiflora
Cagra.1336s0027 1.0kb downstream 1.0kb downstream 3933 true Scaffold1336: 88483-92415 Capsella grandiflora
Cagra.1336s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 91416-92415 Capsella grandiflora
Cagra.1336s0027 2.0kb upstream 2.0kb upstream 4933 true Scaffold1336: 86483-91415 Capsella grandiflora
Cagra.1336s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 86483-88482 Capsella grandiflora
Cagra.1336s0027 2.0kb downstream 2.0kb downstream 4933 true Scaffold1336: 88483-93415 Capsella grandiflora
Cagra.1336s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 91416-93415 Capsella grandiflora
Cagra.1336s0027 5.0kb upstream 5.0kb upstream 7933 true Scaffold1336: 83483-91415 Capsella grandiflora
Cagra.1336s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 83483-88482 Capsella grandiflora
Cagra.1336s0027 5.0kb downstream 5.0kb downstream 7933 true Scaffold1336: 88483-96415 Capsella grandiflora
Cagra.1336s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 91416-96415 Capsella grandiflora
Cagra.1336s0027 10.0kb upstream 10.0kb upstream 12933 true Scaffold1336: 78483-91415 Capsella grandiflora
Cagra.1336s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 78483-88482 Capsella grandiflora
Cagra.1336s0027 10.0kb downstream 10.0kb downstream 11178 true Scaffold1336: 88483-99660 Capsella grandiflora
Cagra.1336s0027 10.0kb downstream 10.0kb downstream 8245 false Scaffold1336: 91416-99660 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377276 5261 Brassicaceae View MSA
123827382 5264 Brassicales-Malvales View MSA
124341113 5266 SBM View MSA
124241446 5268 Malvidae View MSA
124050364 5270 Rosid View MSA
123743809 5271 Pentapetalae View MSA
122791846 5272 Eudicot View MSA
122046545 5273 Angiosperm View MSA
121347245 5274 Embryophyte View MSA
123428005 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain