Gene : Cagra.1360s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24098:SF5 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  4
Name:  ? Cagra.1360s0004 Secondary Identifier:  ? PAC:28918497
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1360s0004 0.5kb upstream 0.5kb upstream 6931 true Scaffold1360: 14834-21764 Capsella grandiflora
Cagra.1360s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1360: 21265-21764 Capsella grandiflora
Cagra.1360s0004 0.5kb downstream 0.5kb downstream 6931 true Scaffold1360: 14334-21264 Capsella grandiflora
Cagra.1360s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1360: 14334-14833 Capsella grandiflora
Cagra.1360s0004 1.0kb upstream 1.0kb upstream 7431 true Scaffold1360: 14834-22264 Capsella grandiflora
Cagra.1360s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1360: 21265-22264 Capsella grandiflora
Cagra.1360s0004 1.0kb downstream 1.0kb downstream 7431 true Scaffold1360: 13834-21264 Capsella grandiflora
Cagra.1360s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1360: 13834-14833 Capsella grandiflora
Cagra.1360s0004 2.0kb upstream 2.0kb upstream 8431 true Scaffold1360: 14834-23264 Capsella grandiflora
Cagra.1360s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1360: 21265-23264 Capsella grandiflora
Cagra.1360s0004 2.0kb downstream 2.0kb downstream 8431 true Scaffold1360: 12834-21264 Capsella grandiflora
Cagra.1360s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1360: 12834-14833 Capsella grandiflora
Cagra.1360s0004 5.0kb upstream 5.0kb upstream 11431 true Scaffold1360: 14834-26264 Capsella grandiflora
Cagra.1360s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1360: 21265-26264 Capsella grandiflora
Cagra.1360s0004 5.0kb downstream 5.0kb downstream 11431 true Scaffold1360: 9834-21264 Capsella grandiflora
Cagra.1360s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1360: 9834-14833 Capsella grandiflora
Cagra.1360s0004 10.0kb upstream 10.0kb upstream 16431 true Scaffold1360: 14834-31264 Capsella grandiflora
Cagra.1360s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1360: 21265-31264 Capsella grandiflora
Cagra.1360s0004 10.0kb downstream 10.0kb downstream 16431 true Scaffold1360: 4834-21264 Capsella grandiflora
Cagra.1360s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1360: 4834-14833 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368263 5261 Brassicaceae View MSA
123840297 5264 Brassicales-Malvales View MSA
124346480 5266 SBM View MSA
124247892 5268 Malvidae View MSA
124068240 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain