Gene : Cagra.1360s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23415 - CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 Genomic Order:  2
Name:  ? Cagra.1360s0002 Secondary Identifier:  ? PAC:28918494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1360s0002 0.5kb upstream 0.5kb upstream 1606 true Scaffold1360: 11571-13176 Capsella grandiflora
Cagra.1360s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1360: 12677-13176 Capsella grandiflora
Cagra.1360s0002 0.5kb downstream 0.5kb downstream 1606 true Scaffold1360: 11071-12676 Capsella grandiflora
Cagra.1360s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1360: 11071-11570 Capsella grandiflora
Cagra.1360s0002 1.0kb upstream 1.0kb upstream 2106 true Scaffold1360: 11571-13676 Capsella grandiflora
Cagra.1360s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1360: 12677-13676 Capsella grandiflora
Cagra.1360s0002 1.0kb downstream 1.0kb downstream 2106 true Scaffold1360: 10571-12676 Capsella grandiflora
Cagra.1360s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1360: 10571-11570 Capsella grandiflora
Cagra.1360s0002 2.0kb upstream 2.0kb upstream 3106 true Scaffold1360: 11571-14676 Capsella grandiflora
Cagra.1360s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1360: 12677-14676 Capsella grandiflora
Cagra.1360s0002 2.0kb downstream 2.0kb downstream 3106 true Scaffold1360: 9571-12676 Capsella grandiflora
Cagra.1360s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1360: 9571-11570 Capsella grandiflora
Cagra.1360s0002 5.0kb upstream 5.0kb upstream 6106 true Scaffold1360: 11571-17676 Capsella grandiflora
Cagra.1360s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1360: 12677-17676 Capsella grandiflora
Cagra.1360s0002 5.0kb downstream 5.0kb downstream 6106 true Scaffold1360: 6571-12676 Capsella grandiflora
Cagra.1360s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1360: 6571-11570 Capsella grandiflora
Cagra.1360s0002 10.0kb upstream 10.0kb upstream 11106 true Scaffold1360: 11571-22676 Capsella grandiflora
Cagra.1360s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1360: 12677-22676 Capsella grandiflora
Cagra.1360s0002 10.0kb downstream 10.0kb downstream 11106 true Scaffold1360: 1571-12676 Capsella grandiflora
Cagra.1360s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1360: 1571-11570 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360477 5261 Brassicaceae View MSA
123832081 5264 Brassicales-Malvales View MSA
124345549 5266 SBM View MSA
124251200 5268 Malvidae View MSA
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain