Gene : Cagra.1361s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  7
Name:  ? Cagra.1361s0007 Secondary Identifier:  ? PAC:28915528
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0007 0.5kb upstream 0.5kb upstream 3559 true Scaffold1361: 26453-30011 Capsella grandiflora
Cagra.1361s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 29512-30011 Capsella grandiflora
Cagra.1361s0007 0.5kb downstream 0.5kb downstream 3559 true Scaffold1361: 25953-29511 Capsella grandiflora
Cagra.1361s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 25953-26452 Capsella grandiflora
Cagra.1361s0007 1.0kb upstream 1.0kb upstream 4059 true Scaffold1361: 26453-30511 Capsella grandiflora
Cagra.1361s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 29512-30511 Capsella grandiflora
Cagra.1361s0007 1.0kb downstream 1.0kb downstream 4059 true Scaffold1361: 25453-29511 Capsella grandiflora
Cagra.1361s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 25453-26452 Capsella grandiflora
Cagra.1361s0007 2.0kb upstream 2.0kb upstream 5059 true Scaffold1361: 26453-31511 Capsella grandiflora
Cagra.1361s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 29512-31511 Capsella grandiflora
Cagra.1361s0007 2.0kb downstream 2.0kb downstream 5059 true Scaffold1361: 24453-29511 Capsella grandiflora
Cagra.1361s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 24453-26452 Capsella grandiflora
Cagra.1361s0007 5.0kb upstream 5.0kb upstream 8059 true Scaffold1361: 26453-34511 Capsella grandiflora
Cagra.1361s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 29512-34511 Capsella grandiflora
Cagra.1361s0007 5.0kb downstream 5.0kb downstream 8059 true Scaffold1361: 21453-29511 Capsella grandiflora
Cagra.1361s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 21453-26452 Capsella grandiflora
Cagra.1361s0007 10.0kb upstream 10.0kb upstream 13059 true Scaffold1361: 26453-39511 Capsella grandiflora
Cagra.1361s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 29512-39511 Capsella grandiflora
Cagra.1361s0007 10.0kb downstream 10.0kb downstream 13059 true Scaffold1361: 16453-29511 Capsella grandiflora
Cagra.1361s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 16453-26452 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371582 5261 Brassicaceae View MSA
123833519 5264 Brassicales-Malvales View MSA
124350910 5266 SBM View MSA
124253835 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain