Gene : Cagra.1361s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20275:SF2 - NADH KINASE Genomic Order:  5
Name:  ? Cagra.1361s0005 Secondary Identifier:  ? PAC:28915559
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0005 0.5kb upstream 0.5kb upstream 2707 true Scaffold1361: 20746-23452 Capsella grandiflora
Cagra.1361s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 20746-21245 Capsella grandiflora
Cagra.1361s0005 0.5kb downstream 0.5kb downstream 2707 true Scaffold1361: 21246-23952 Capsella grandiflora
Cagra.1361s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 23453-23952 Capsella grandiflora
Cagra.1361s0005 1.0kb upstream 1.0kb upstream 3207 true Scaffold1361: 20246-23452 Capsella grandiflora
Cagra.1361s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 20246-21245 Capsella grandiflora
Cagra.1361s0005 1.0kb downstream 1.0kb downstream 3207 true Scaffold1361: 21246-24452 Capsella grandiflora
Cagra.1361s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 23453-24452 Capsella grandiflora
Cagra.1361s0005 2.0kb upstream 2.0kb upstream 4207 true Scaffold1361: 19246-23452 Capsella grandiflora
Cagra.1361s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 19246-21245 Capsella grandiflora
Cagra.1361s0005 2.0kb downstream 2.0kb downstream 4207 true Scaffold1361: 21246-25452 Capsella grandiflora
Cagra.1361s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 23453-25452 Capsella grandiflora
Cagra.1361s0005 5.0kb upstream 5.0kb upstream 7207 true Scaffold1361: 16246-23452 Capsella grandiflora
Cagra.1361s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 16246-21245 Capsella grandiflora
Cagra.1361s0005 5.0kb downstream 5.0kb downstream 7207 true Scaffold1361: 21246-28452 Capsella grandiflora
Cagra.1361s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 23453-28452 Capsella grandiflora
Cagra.1361s0005 10.0kb upstream 10.0kb upstream 12207 true Scaffold1361: 11246-23452 Capsella grandiflora
Cagra.1361s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 11246-21245 Capsella grandiflora
Cagra.1361s0005 10.0kb downstream 10.0kb downstream 12207 true Scaffold1361: 21246-33452 Capsella grandiflora
Cagra.1361s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 23453-33452 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377787 5261 Brassicaceae View MSA
123831135 5264 Brassicales-Malvales View MSA
124339693 5266 SBM View MSA
124239844 5268 Malvidae View MSA
124067358 5270 Rosid View MSA
123747292 5271 Pentapetalae View MSA
122792371 5272 Eudicot View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain