Gene : Cagra.1361s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12497:SF1 - N-ACYLPHOSPHATIDYLETHANOLAMINE SYNTHASE Genomic Order:  15
Name:  ? Cagra.1361s0015 Secondary Identifier:  ? PAC:28915586
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5995 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6803 Capsella grandiflora pathologic  
Cgrandiflora PWY-7409 Capsella grandiflora pathologic  
Cgrandiflora PWY-7416 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0015 0.5kb upstream 0.5kb upstream 2575 true Scaffold1361: 49370-51944 Capsella grandiflora
Cagra.1361s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 49370-49869 Capsella grandiflora
Cagra.1361s0015 0.5kb downstream 0.5kb downstream 2575 true Scaffold1361: 49870-52444 Capsella grandiflora
Cagra.1361s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 51945-52444 Capsella grandiflora
Cagra.1361s0015 1.0kb upstream 1.0kb upstream 3075 true Scaffold1361: 48870-51944 Capsella grandiflora
Cagra.1361s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 48870-49869 Capsella grandiflora
Cagra.1361s0015 1.0kb downstream 1.0kb downstream 3075 true Scaffold1361: 49870-52944 Capsella grandiflora
Cagra.1361s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 51945-52944 Capsella grandiflora
Cagra.1361s0015 2.0kb upstream 2.0kb upstream 4075 true Scaffold1361: 47870-51944 Capsella grandiflora
Cagra.1361s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 47870-49869 Capsella grandiflora
Cagra.1361s0015 2.0kb downstream 2.0kb downstream 4075 true Scaffold1361: 49870-53944 Capsella grandiflora
Cagra.1361s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 51945-53944 Capsella grandiflora
Cagra.1361s0015 5.0kb upstream 5.0kb upstream 7075 true Scaffold1361: 44870-51944 Capsella grandiflora
Cagra.1361s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 44870-49869 Capsella grandiflora
Cagra.1361s0015 5.0kb downstream 5.0kb downstream 7075 true Scaffold1361: 49870-56944 Capsella grandiflora
Cagra.1361s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 51945-56944 Capsella grandiflora
Cagra.1361s0015 10.0kb upstream 10.0kb upstream 12075 true Scaffold1361: 39870-51944 Capsella grandiflora
Cagra.1361s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 39870-49869 Capsella grandiflora
Cagra.1361s0015 10.0kb downstream 10.0kb downstream 12075 true Scaffold1361: 49870-61944 Capsella grandiflora
Cagra.1361s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 51945-61944 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372626 5261 Brassicaceae View MSA
123829484 5264 Brassicales-Malvales View MSA
124337322 5266 SBM View MSA
124242372 5268 Malvidae View MSA
124050156 5270 Rosid View MSA
123738586 5271 Pentapetalae View MSA
122788157 5272 Eudicot View MSA
122042520 5273 Angiosperm View MSA
121345475 5274 Embryophyte View MSA
123428376 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain