Gene : Cagra.1268s0053 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  53
Name:  ? Cagra.1268s0053 Secondary Identifier:  ? PAC:28893637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0053 0.5kb upstream 0.5kb upstream 2506 true Scaffold1268: 178660-181165 Capsella grandiflora
Cagra.1268s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 180666-181165 Capsella grandiflora
Cagra.1268s0053 0.5kb downstream 0.5kb downstream 2506 true Scaffold1268: 178160-180665 Capsella grandiflora
Cagra.1268s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 178160-178659 Capsella grandiflora
Cagra.1268s0053 1.0kb upstream 1.0kb upstream 3006 true Scaffold1268: 178660-181665 Capsella grandiflora
Cagra.1268s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 180666-181665 Capsella grandiflora
Cagra.1268s0053 1.0kb downstream 1.0kb downstream 3006 true Scaffold1268: 177660-180665 Capsella grandiflora
Cagra.1268s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 177660-178659 Capsella grandiflora
Cagra.1268s0053 2.0kb upstream 2.0kb upstream 4006 true Scaffold1268: 178660-182665 Capsella grandiflora
Cagra.1268s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 180666-182665 Capsella grandiflora
Cagra.1268s0053 2.0kb downstream 2.0kb downstream 4006 true Scaffold1268: 176660-180665 Capsella grandiflora
Cagra.1268s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 176660-178659 Capsella grandiflora
Cagra.1268s0053 5.0kb upstream 5.0kb upstream 7006 true Scaffold1268: 178660-185665 Capsella grandiflora
Cagra.1268s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 180666-185665 Capsella grandiflora
Cagra.1268s0053 5.0kb downstream 5.0kb downstream 7006 true Scaffold1268: 173660-180665 Capsella grandiflora
Cagra.1268s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 173660-178659 Capsella grandiflora
Cagra.1268s0053 10.0kb upstream 10.0kb upstream 12006 true Scaffold1268: 178660-190665 Capsella grandiflora
Cagra.1268s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 180666-190665 Capsella grandiflora
Cagra.1268s0053 10.0kb downstream 10.0kb downstream 12006 true Scaffold1268: 168660-180665 Capsella grandiflora
Cagra.1268s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 168660-178659 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371492 5261 Brassicaceae View MSA
123800172 5264 Brassicales-Malvales View MSA
124297617 5266 SBM View MSA
124149456 5268 Malvidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain