Gene : Cagra.1268s0057 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  57
Name:  ? Cagra.1268s0057 Secondary Identifier:  ? PAC:28893636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0057 0.5kb upstream 0.5kb upstream 2526 true Scaffold1268: 190472-192997 Capsella grandiflora
Cagra.1268s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 192498-192997 Capsella grandiflora
Cagra.1268s0057 0.5kb downstream 0.5kb downstream 2526 true Scaffold1268: 189972-192497 Capsella grandiflora
Cagra.1268s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 189972-190471 Capsella grandiflora
Cagra.1268s0057 1.0kb upstream 1.0kb upstream 3026 true Scaffold1268: 190472-193497 Capsella grandiflora
Cagra.1268s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 192498-193497 Capsella grandiflora
Cagra.1268s0057 1.0kb downstream 1.0kb downstream 3026 true Scaffold1268: 189472-192497 Capsella grandiflora
Cagra.1268s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 189472-190471 Capsella grandiflora
Cagra.1268s0057 2.0kb upstream 2.0kb upstream 4026 true Scaffold1268: 190472-194497 Capsella grandiflora
Cagra.1268s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 192498-194497 Capsella grandiflora
Cagra.1268s0057 2.0kb downstream 2.0kb downstream 4026 true Scaffold1268: 188472-192497 Capsella grandiflora
Cagra.1268s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 188472-190471 Capsella grandiflora
Cagra.1268s0057 5.0kb upstream 5.0kb upstream 5458 true Scaffold1268: 190472-195929 Capsella grandiflora
Cagra.1268s0057 5.0kb upstream 5.0kb upstream 3432 false Scaffold1268: 192498-195929 Capsella grandiflora
Cagra.1268s0057 5.0kb downstream 5.0kb downstream 7026 true Scaffold1268: 185472-192497 Capsella grandiflora
Cagra.1268s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 185472-190471 Capsella grandiflora
Cagra.1268s0057 10.0kb upstream 10.0kb upstream 5458 true Scaffold1268: 190472-195929 Capsella grandiflora
Cagra.1268s0057 10.0kb upstream 10.0kb upstream 3432 false Scaffold1268: 192498-195929 Capsella grandiflora
Cagra.1268s0057 10.0kb downstream 10.0kb downstream 12026 true Scaffold1268: 180472-192497 Capsella grandiflora
Cagra.1268s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 180472-190471 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364957 5261 Brassicaceae View MSA
123837668 5264 Brassicales-Malvales View MSA
124343860 5266 SBM View MSA
124238633 5268 Malvidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain