Gene : Cagra.1305s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31490:SF2 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  5
Name:  ? Cagra.1305s0005 Secondary Identifier:  ? PAC:28900669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1305s0005 0.5kb upstream 0.5kb upstream 2565 true Scaffold1305: 15560-18124 Capsella grandiflora
Cagra.1305s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1305: 17625-18124 Capsella grandiflora
Cagra.1305s0005 0.5kb downstream 0.5kb downstream 2565 true Scaffold1305: 15060-17624 Capsella grandiflora
Cagra.1305s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1305: 15060-15559 Capsella grandiflora
Cagra.1305s0005 1.0kb upstream 1.0kb upstream 3065 true Scaffold1305: 15560-18624 Capsella grandiflora
Cagra.1305s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1305: 17625-18624 Capsella grandiflora
Cagra.1305s0005 1.0kb downstream 1.0kb downstream 3065 true Scaffold1305: 14560-17624 Capsella grandiflora
Cagra.1305s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1305: 14560-15559 Capsella grandiflora
Cagra.1305s0005 2.0kb upstream 2.0kb upstream 4065 true Scaffold1305: 15560-19624 Capsella grandiflora
Cagra.1305s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1305: 17625-19624 Capsella grandiflora
Cagra.1305s0005 2.0kb downstream 2.0kb downstream 4065 true Scaffold1305: 13560-17624 Capsella grandiflora
Cagra.1305s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1305: 13560-15559 Capsella grandiflora
Cagra.1305s0005 5.0kb upstream 5.0kb upstream 7065 true Scaffold1305: 15560-22624 Capsella grandiflora
Cagra.1305s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1305: 17625-22624 Capsella grandiflora
Cagra.1305s0005 5.0kb downstream 5.0kb downstream 7065 true Scaffold1305: 10560-17624 Capsella grandiflora
Cagra.1305s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1305: 10560-15559 Capsella grandiflora
Cagra.1305s0005 10.0kb upstream 10.0kb upstream 12065 true Scaffold1305: 15560-27624 Capsella grandiflora
Cagra.1305s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1305: 17625-27624 Capsella grandiflora
Cagra.1305s0005 10.0kb downstream 10.0kb downstream 12065 true Scaffold1305: 5560-17624 Capsella grandiflora
Cagra.1305s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1305: 5560-15559 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376120 5261 Brassicaceae View MSA
123829097 5264 Brassicales-Malvales View MSA
124342056 5266 SBM View MSA
124248079 5268 Malvidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain