Gene : Cagra.1305s0028 C. grandiflora v1.1
Defline:  (1 of 2) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  28
Name:  ? Cagra.1305s0028 Secondary Identifier:  ? PAC:28900654
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LEU-DEG2-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1305s0028 0.5kb upstream 0.5kb upstream 4088 true Scaffold1305: 90866-94953 Capsella grandiflora
Cagra.1305s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold1305: 90866-91365 Capsella grandiflora
Cagra.1305s0028 0.5kb downstream 0.5kb downstream 4088 true Scaffold1305: 91366-95453 Capsella grandiflora
Cagra.1305s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold1305: 94954-95453 Capsella grandiflora
Cagra.1305s0028 1.0kb upstream 1.0kb upstream 4588 true Scaffold1305: 90366-94953 Capsella grandiflora
Cagra.1305s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold1305: 90366-91365 Capsella grandiflora
Cagra.1305s0028 1.0kb downstream 1.0kb downstream 4588 true Scaffold1305: 91366-95953 Capsella grandiflora
Cagra.1305s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold1305: 94954-95953 Capsella grandiflora
Cagra.1305s0028 2.0kb upstream 2.0kb upstream 5588 true Scaffold1305: 89366-94953 Capsella grandiflora
Cagra.1305s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold1305: 89366-91365 Capsella grandiflora
Cagra.1305s0028 2.0kb downstream 2.0kb downstream 5588 true Scaffold1305: 91366-96953 Capsella grandiflora
Cagra.1305s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold1305: 94954-96953 Capsella grandiflora
Cagra.1305s0028 5.0kb upstream 5.0kb upstream 8588 true Scaffold1305: 86366-94953 Capsella grandiflora
Cagra.1305s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold1305: 86366-91365 Capsella grandiflora
Cagra.1305s0028 5.0kb downstream 5.0kb downstream 8588 true Scaffold1305: 91366-99953 Capsella grandiflora
Cagra.1305s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold1305: 94954-99953 Capsella grandiflora
Cagra.1305s0028 10.0kb upstream 10.0kb upstream 13588 true Scaffold1305: 81366-94953 Capsella grandiflora
Cagra.1305s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold1305: 81366-91365 Capsella grandiflora
Cagra.1305s0028 10.0kb downstream 10.0kb downstream 13588 true Scaffold1305: 91366-104953 Capsella grandiflora
Cagra.1305s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold1305: 94954-104953 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373218 5261 Brassicaceae View MSA
123839452 5264 Brassicales-Malvales View MSA
124340930 5266 SBM View MSA
124238998 5268 Malvidae View MSA
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain