Gene : Cagra.1262s0002 C. grandiflora v1.1
Defline:  (1 of 1) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  2
Name:  ? Cagra.1262s0002 Secondary Identifier:  ? PAC:28906709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1262s0002 0.5kb upstream 0.5kb upstream 11803 true Scaffold1262: 3571-15373 Capsella grandiflora
Cagra.1262s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1262: 3571-4070 Capsella grandiflora
Cagra.1262s0002 0.5kb downstream 0.5kb downstream 11803 true Scaffold1262: 4071-15873 Capsella grandiflora
Cagra.1262s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1262: 15374-15873 Capsella grandiflora
Cagra.1262s0002 1.0kb upstream 1.0kb upstream 12303 true Scaffold1262: 3071-15373 Capsella grandiflora
Cagra.1262s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1262: 3071-4070 Capsella grandiflora
Cagra.1262s0002 1.0kb downstream 1.0kb downstream 12303 true Scaffold1262: 4071-16373 Capsella grandiflora
Cagra.1262s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1262: 15374-16373 Capsella grandiflora
Cagra.1262s0002 2.0kb upstream 2.0kb upstream 13303 true Scaffold1262: 2071-15373 Capsella grandiflora
Cagra.1262s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1262: 2071-4070 Capsella grandiflora
Cagra.1262s0002 2.0kb downstream 2.0kb downstream 13303 true Scaffold1262: 4071-17373 Capsella grandiflora
Cagra.1262s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1262: 15374-17373 Capsella grandiflora
Cagra.1262s0002 5.0kb upstream 5.0kb upstream 15373 true Scaffold1262: 1-15373 Capsella grandiflora
Cagra.1262s0002 5.0kb upstream 5.0kb upstream 4070 false Scaffold1262: 1-4070 Capsella grandiflora
Cagra.1262s0002 5.0kb downstream 5.0kb downstream 16303 true Scaffold1262: 4071-20373 Capsella grandiflora
Cagra.1262s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1262: 15374-20373 Capsella grandiflora
Cagra.1262s0002 10.0kb upstream 10.0kb upstream 15373 true Scaffold1262: 1-15373 Capsella grandiflora
Cagra.1262s0002 10.0kb upstream 10.0kb upstream 4070 false Scaffold1262: 1-4070 Capsella grandiflora
Cagra.1262s0002 10.0kb downstream 10.0kb downstream 21303 true Scaffold1262: 4071-25373 Capsella grandiflora
Cagra.1262s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1262: 15374-25373 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372881 5261 Brassicaceae View MSA
123834499 5264 Brassicales-Malvales View MSA
124339874 5266 SBM View MSA
124238685 5268 Malvidae View MSA
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain