Gene : Cagra.1262s0030 C. grandiflora v1.1
Defline:  (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  30
Name:  ? Cagra.1262s0030 Secondary Identifier:  ? PAC:28906733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1262s0030 0.5kb upstream 0.5kb upstream 2179 true Scaffold1262: 115327-117505 Capsella grandiflora
Cagra.1262s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1262: 117006-117505 Capsella grandiflora
Cagra.1262s0030 0.5kb downstream 0.5kb downstream 2179 true Scaffold1262: 114827-117005 Capsella grandiflora
Cagra.1262s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1262: 114827-115326 Capsella grandiflora
Cagra.1262s0030 1.0kb upstream 1.0kb upstream 2679 true Scaffold1262: 115327-118005 Capsella grandiflora
Cagra.1262s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1262: 117006-118005 Capsella grandiflora
Cagra.1262s0030 1.0kb downstream 1.0kb downstream 2679 true Scaffold1262: 114327-117005 Capsella grandiflora
Cagra.1262s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1262: 114327-115326 Capsella grandiflora
Cagra.1262s0030 2.0kb upstream 2.0kb upstream 3679 true Scaffold1262: 115327-119005 Capsella grandiflora
Cagra.1262s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1262: 117006-119005 Capsella grandiflora
Cagra.1262s0030 2.0kb downstream 2.0kb downstream 3679 true Scaffold1262: 113327-117005 Capsella grandiflora
Cagra.1262s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1262: 113327-115326 Capsella grandiflora
Cagra.1262s0030 5.0kb upstream 5.0kb upstream 6679 true Scaffold1262: 115327-122005 Capsella grandiflora
Cagra.1262s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1262: 117006-122005 Capsella grandiflora
Cagra.1262s0030 5.0kb downstream 5.0kb downstream 6679 true Scaffold1262: 110327-117005 Capsella grandiflora
Cagra.1262s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1262: 110327-115326 Capsella grandiflora
Cagra.1262s0030 10.0kb upstream 10.0kb upstream 11679 true Scaffold1262: 115327-127005 Capsella grandiflora
Cagra.1262s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1262: 117006-127005 Capsella grandiflora
Cagra.1262s0030 10.0kb downstream 10.0kb downstream 11679 true Scaffold1262: 105327-117005 Capsella grandiflora
Cagra.1262s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1262: 105327-115326 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122382001 5261 Brassicaceae View MSA
123841728 5264 Brassicales-Malvales View MSA
124352018 5266 SBM View MSA
124252637 5268 Malvidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain