Gene : Cagra.1262s0026 C. grandiflora v1.1
Defline:  (1 of 1) 3.2.1.154//3.2.1.26//3.2.1.65//3.2.1.80 - Fructan beta-(2,6)-fructosidase / Levanase // Beta-fructofuranosidase / Saccharase // Fructan beta-fructosidase / Fructanase Genomic Order:  26
Name:  ? Cagra.1262s0026 Secondary Identifier:  ? PAC:28906729
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-621 Capsella grandiflora pathologic  
Cgrandiflora PWY66-373 Capsella grandiflora pathologic  
Cgrandiflora PWY-862 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1262s0026 0.5kb upstream 0.5kb upstream 3131 true Scaffold1262: 97038-100168 Capsella grandiflora
Cagra.1262s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1262: 99669-100168 Capsella grandiflora
Cagra.1262s0026 0.5kb downstream 0.5kb downstream 3131 true Scaffold1262: 96538-99668 Capsella grandiflora
Cagra.1262s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1262: 96538-97037 Capsella grandiflora
Cagra.1262s0026 1.0kb upstream 1.0kb upstream 3631 true Scaffold1262: 97038-100668 Capsella grandiflora
Cagra.1262s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1262: 99669-100668 Capsella grandiflora
Cagra.1262s0026 1.0kb downstream 1.0kb downstream 3631 true Scaffold1262: 96038-99668 Capsella grandiflora
Cagra.1262s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1262: 96038-97037 Capsella grandiflora
Cagra.1262s0026 2.0kb upstream 2.0kb upstream 4631 true Scaffold1262: 97038-101668 Capsella grandiflora
Cagra.1262s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1262: 99669-101668 Capsella grandiflora
Cagra.1262s0026 2.0kb downstream 2.0kb downstream 4631 true Scaffold1262: 95038-99668 Capsella grandiflora
Cagra.1262s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1262: 95038-97037 Capsella grandiflora
Cagra.1262s0026 5.0kb upstream 5.0kb upstream 7631 true Scaffold1262: 97038-104668 Capsella grandiflora
Cagra.1262s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1262: 99669-104668 Capsella grandiflora
Cagra.1262s0026 5.0kb downstream 5.0kb downstream 7631 true Scaffold1262: 92038-99668 Capsella grandiflora
Cagra.1262s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1262: 92038-97037 Capsella grandiflora
Cagra.1262s0026 10.0kb upstream 10.0kb upstream 12631 true Scaffold1262: 97038-109668 Capsella grandiflora
Cagra.1262s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1262: 99669-109668 Capsella grandiflora
Cagra.1262s0026 10.0kb downstream 10.0kb downstream 12631 true Scaffold1262: 87038-99668 Capsella grandiflora
Cagra.1262s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1262: 87038-97037 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363865 5261 Brassicaceae View MSA
123798631 5264 Brassicales-Malvales View MSA
124296240 5266 SBM View MSA
124249602 5268 Malvidae View MSA
124070033 5270 Rosid View MSA
123752983 5271 Pentapetalae View MSA
122793631 5272 Eudicot View MSA
122047232 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain