Gene : Cagra.1262s0039 C. grandiflora v1.1
Defline:  (1 of 10) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  39
Name:  ? Cagra.1262s0039 Secondary Identifier:  ? PAC:28906691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1262s0039 0.5kb upstream 0.5kb upstream 1853 true Scaffold1262: 141804-143656 Capsella grandiflora
Cagra.1262s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1262: 141804-142303 Capsella grandiflora
Cagra.1262s0039 0.5kb downstream 0.5kb downstream 1853 true Scaffold1262: 142304-144156 Capsella grandiflora
Cagra.1262s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1262: 143657-144156 Capsella grandiflora
Cagra.1262s0039 1.0kb upstream 1.0kb upstream 2353 true Scaffold1262: 141304-143656 Capsella grandiflora
Cagra.1262s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1262: 141304-142303 Capsella grandiflora
Cagra.1262s0039 1.0kb downstream 1.0kb downstream 2353 true Scaffold1262: 142304-144656 Capsella grandiflora
Cagra.1262s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1262: 143657-144656 Capsella grandiflora
Cagra.1262s0039 2.0kb upstream 2.0kb upstream 3353 true Scaffold1262: 140304-143656 Capsella grandiflora
Cagra.1262s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1262: 140304-142303 Capsella grandiflora
Cagra.1262s0039 2.0kb downstream 2.0kb downstream 3353 true Scaffold1262: 142304-145656 Capsella grandiflora
Cagra.1262s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1262: 143657-145656 Capsella grandiflora
Cagra.1262s0039 5.0kb upstream 5.0kb upstream 6353 true Scaffold1262: 137304-143656 Capsella grandiflora
Cagra.1262s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1262: 137304-142303 Capsella grandiflora
Cagra.1262s0039 5.0kb downstream 5.0kb downstream 6353 true Scaffold1262: 142304-148656 Capsella grandiflora
Cagra.1262s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1262: 143657-148656 Capsella grandiflora
Cagra.1262s0039 10.0kb upstream 10.0kb upstream 11353 true Scaffold1262: 132304-143656 Capsella grandiflora
Cagra.1262s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1262: 132304-142303 Capsella grandiflora
Cagra.1262s0039 10.0kb downstream 10.0kb downstream 11353 true Scaffold1262: 142304-153656 Capsella grandiflora
Cagra.1262s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1262: 143657-153656 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122367123 5261 Brassicaceae View MSA
123841516 5264 Brassicales-Malvales View MSA
124348801 5266 SBM View MSA
124247550 5268 Malvidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain