Gene : Cagra.1264s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  13
Name:  ? Cagra.1264s0013 Secondary Identifier:  ? PAC:28918743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1264s0013 0.5kb upstream 0.5kb upstream 4400 true Scaffold1264: 35690-40089 Capsella grandiflora
Cagra.1264s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1264: 35690-36189 Capsella grandiflora
Cagra.1264s0013 0.5kb downstream 0.5kb downstream 4400 true Scaffold1264: 36190-40589 Capsella grandiflora
Cagra.1264s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1264: 40090-40589 Capsella grandiflora
Cagra.1264s0013 1.0kb upstream 1.0kb upstream 4900 true Scaffold1264: 35190-40089 Capsella grandiflora
Cagra.1264s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1264: 35190-36189 Capsella grandiflora
Cagra.1264s0013 1.0kb downstream 1.0kb downstream 4900 true Scaffold1264: 36190-41089 Capsella grandiflora
Cagra.1264s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1264: 40090-41089 Capsella grandiflora
Cagra.1264s0013 2.0kb upstream 2.0kb upstream 5900 true Scaffold1264: 34190-40089 Capsella grandiflora
Cagra.1264s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1264: 34190-36189 Capsella grandiflora
Cagra.1264s0013 2.0kb downstream 2.0kb downstream 5900 true Scaffold1264: 36190-42089 Capsella grandiflora
Cagra.1264s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1264: 40090-42089 Capsella grandiflora
Cagra.1264s0013 5.0kb upstream 5.0kb upstream 8900 true Scaffold1264: 31190-40089 Capsella grandiflora
Cagra.1264s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1264: 31190-36189 Capsella grandiflora
Cagra.1264s0013 5.0kb downstream 5.0kb downstream 8900 true Scaffold1264: 36190-45089 Capsella grandiflora
Cagra.1264s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1264: 40090-45089 Capsella grandiflora
Cagra.1264s0013 10.0kb upstream 10.0kb upstream 13900 true Scaffold1264: 26190-40089 Capsella grandiflora
Cagra.1264s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1264: 26190-36189 Capsella grandiflora
Cagra.1264s0013 10.0kb downstream 10.0kb downstream 9191 true Scaffold1264: 36190-45380 Capsella grandiflora
Cagra.1264s0013 10.0kb downstream 10.0kb downstream 5291 false Scaffold1264: 40090-45380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368189 5261 Brassicaceae View MSA
123840371 5264 Brassicales-Malvales View MSA
124343880 5266 SBM View MSA
124244393 5268 Malvidae View MSA
124069004 5270 Rosid View MSA
123739785 5271 Pentapetalae View MSA
122796988 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain