Gene : Cagra.1268s0004 C. grandiflora v1.1
Defline:  (1 of 1) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily Genomic Order:  4
Name:  ? Cagra.1268s0004 Secondary Identifier:  ? PAC:28893629
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0004 0.5kb upstream 0.5kb upstream 2931 true Scaffold1268: 11150-14080 Capsella grandiflora
Cagra.1268s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 13581-14080 Capsella grandiflora
Cagra.1268s0004 0.5kb downstream 0.5kb downstream 2931 true Scaffold1268: 10650-13580 Capsella grandiflora
Cagra.1268s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 10650-11149 Capsella grandiflora
Cagra.1268s0004 1.0kb upstream 1.0kb upstream 3431 true Scaffold1268: 11150-14580 Capsella grandiflora
Cagra.1268s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 13581-14580 Capsella grandiflora
Cagra.1268s0004 1.0kb downstream 1.0kb downstream 3431 true Scaffold1268: 10150-13580 Capsella grandiflora
Cagra.1268s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 10150-11149 Capsella grandiflora
Cagra.1268s0004 2.0kb upstream 2.0kb upstream 4431 true Scaffold1268: 11150-15580 Capsella grandiflora
Cagra.1268s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 13581-15580 Capsella grandiflora
Cagra.1268s0004 2.0kb downstream 2.0kb downstream 4431 true Scaffold1268: 9150-13580 Capsella grandiflora
Cagra.1268s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 9150-11149 Capsella grandiflora
Cagra.1268s0004 5.0kb upstream 5.0kb upstream 7431 true Scaffold1268: 11150-18580 Capsella grandiflora
Cagra.1268s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 13581-18580 Capsella grandiflora
Cagra.1268s0004 5.0kb downstream 5.0kb downstream 7431 true Scaffold1268: 6150-13580 Capsella grandiflora
Cagra.1268s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 6150-11149 Capsella grandiflora
Cagra.1268s0004 10.0kb upstream 10.0kb upstream 12431 true Scaffold1268: 11150-23580 Capsella grandiflora
Cagra.1268s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 13581-23580 Capsella grandiflora
Cagra.1268s0004 10.0kb downstream 10.0kb downstream 12431 true Scaffold1268: 1150-13580 Capsella grandiflora
Cagra.1268s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 1150-11149 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041103 5273 Angiosperm View MSA
122369906 5261 Brassicaceae View MSA
123830609 5264 Brassicales-Malvales View MSA
124342058 5266 SBM View MSA
124239979 5268 Malvidae View MSA
124063155 5270 Rosid View MSA
123740739 5271 Pentapetalae View MSA
122788079 5272 Eudicot View MSA
121345808 5274 Embryophyte View MSA
123427736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain