Gene : Cagra.1268s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11266:SF40 - MPV17/PMP22 FAMILY PROTEIN Genomic Order:  26
Name:  ? Cagra.1268s0026 Secondary Identifier:  ? PAC:28893638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0026 0.5kb upstream 0.5kb upstream 2705 true Scaffold1268: 77861-80565 Capsella grandiflora
Cagra.1268s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 80066-80565 Capsella grandiflora
Cagra.1268s0026 0.5kb downstream 0.5kb downstream 2705 true Scaffold1268: 77361-80065 Capsella grandiflora
Cagra.1268s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 77361-77860 Capsella grandiflora
Cagra.1268s0026 1.0kb upstream 1.0kb upstream 3205 true Scaffold1268: 77861-81065 Capsella grandiflora
Cagra.1268s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 80066-81065 Capsella grandiflora
Cagra.1268s0026 1.0kb downstream 1.0kb downstream 3205 true Scaffold1268: 76861-80065 Capsella grandiflora
Cagra.1268s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 76861-77860 Capsella grandiflora
Cagra.1268s0026 2.0kb upstream 2.0kb upstream 4205 true Scaffold1268: 77861-82065 Capsella grandiflora
Cagra.1268s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 80066-82065 Capsella grandiflora
Cagra.1268s0026 2.0kb downstream 2.0kb downstream 4205 true Scaffold1268: 75861-80065 Capsella grandiflora
Cagra.1268s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 75861-77860 Capsella grandiflora
Cagra.1268s0026 5.0kb upstream 5.0kb upstream 7205 true Scaffold1268: 77861-85065 Capsella grandiflora
Cagra.1268s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 80066-85065 Capsella grandiflora
Cagra.1268s0026 5.0kb downstream 5.0kb downstream 7205 true Scaffold1268: 72861-80065 Capsella grandiflora
Cagra.1268s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 72861-77860 Capsella grandiflora
Cagra.1268s0026 10.0kb upstream 10.0kb upstream 12205 true Scaffold1268: 77861-90065 Capsella grandiflora
Cagra.1268s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 80066-90065 Capsella grandiflora
Cagra.1268s0026 10.0kb downstream 10.0kb downstream 12205 true Scaffold1268: 67861-80065 Capsella grandiflora
Cagra.1268s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 67861-77860 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363943 5261 Brassicaceae View MSA
123835037 5264 Brassicales-Malvales View MSA
124338671 5266 SBM View MSA
124248616 5268 Malvidae View MSA
124066364 5270 Rosid View MSA
123751780 5271 Pentapetalae View MSA
122796884 5272 Eudicot View MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain