Gene : Cagra.1268s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11654//PTHR11654:SF146 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  36
Name:  ? Cagra.1268s0036 Secondary Identifier:  ? PAC:28893591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0036 0.5kb upstream 0.5kb upstream 2679 true Scaffold1268: 117961-120639 Capsella grandiflora
Cagra.1268s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 120140-120639 Capsella grandiflora
Cagra.1268s0036 0.5kb downstream 0.5kb downstream 2679 true Scaffold1268: 117461-120139 Capsella grandiflora
Cagra.1268s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 117461-117960 Capsella grandiflora
Cagra.1268s0036 1.0kb upstream 1.0kb upstream 3179 true Scaffold1268: 117961-121139 Capsella grandiflora
Cagra.1268s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 120140-121139 Capsella grandiflora
Cagra.1268s0036 1.0kb downstream 1.0kb downstream 3179 true Scaffold1268: 116961-120139 Capsella grandiflora
Cagra.1268s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 116961-117960 Capsella grandiflora
Cagra.1268s0036 2.0kb upstream 2.0kb upstream 4179 true Scaffold1268: 117961-122139 Capsella grandiflora
Cagra.1268s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 120140-122139 Capsella grandiflora
Cagra.1268s0036 2.0kb downstream 2.0kb downstream 4179 true Scaffold1268: 115961-120139 Capsella grandiflora
Cagra.1268s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 115961-117960 Capsella grandiflora
Cagra.1268s0036 5.0kb upstream 5.0kb upstream 7179 true Scaffold1268: 117961-125139 Capsella grandiflora
Cagra.1268s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 120140-125139 Capsella grandiflora
Cagra.1268s0036 5.0kb downstream 5.0kb downstream 7179 true Scaffold1268: 112961-120139 Capsella grandiflora
Cagra.1268s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 112961-117960 Capsella grandiflora
Cagra.1268s0036 10.0kb upstream 10.0kb upstream 12179 true Scaffold1268: 117961-130139 Capsella grandiflora
Cagra.1268s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 120140-130139 Capsella grandiflora
Cagra.1268s0036 10.0kb downstream 10.0kb downstream 12179 true Scaffold1268: 107961-120139 Capsella grandiflora
Cagra.1268s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 107961-117960 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370341 5261 Brassicaceae View MSA
123836310 5264 Brassicales-Malvales View MSA
124345874 5266 SBM View MSA
124237851 5268 Malvidae View MSA
124066673 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain