Gene : Cagra.1268s0042 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32208:SF29 - F1N21.11-RELATED Genomic Order:  42
Name:  ? Cagra.1268s0042 Secondary Identifier:  ? PAC:28893605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0042 0.5kb upstream 0.5kb upstream 2662 true Scaffold1268: 141274-143935 Capsella grandiflora
Cagra.1268s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 141274-141773 Capsella grandiflora
Cagra.1268s0042 0.5kb downstream 0.5kb downstream 2662 true Scaffold1268: 141774-144435 Capsella grandiflora
Cagra.1268s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 143936-144435 Capsella grandiflora
Cagra.1268s0042 1.0kb upstream 1.0kb upstream 3162 true Scaffold1268: 140774-143935 Capsella grandiflora
Cagra.1268s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 140774-141773 Capsella grandiflora
Cagra.1268s0042 1.0kb downstream 1.0kb downstream 3162 true Scaffold1268: 141774-144935 Capsella grandiflora
Cagra.1268s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 143936-144935 Capsella grandiflora
Cagra.1268s0042 2.0kb upstream 2.0kb upstream 4162 true Scaffold1268: 139774-143935 Capsella grandiflora
Cagra.1268s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 139774-141773 Capsella grandiflora
Cagra.1268s0042 2.0kb downstream 2.0kb downstream 4162 true Scaffold1268: 141774-145935 Capsella grandiflora
Cagra.1268s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 143936-145935 Capsella grandiflora
Cagra.1268s0042 5.0kb upstream 5.0kb upstream 7162 true Scaffold1268: 136774-143935 Capsella grandiflora
Cagra.1268s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 136774-141773 Capsella grandiflora
Cagra.1268s0042 5.0kb downstream 5.0kb downstream 7162 true Scaffold1268: 141774-148935 Capsella grandiflora
Cagra.1268s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 143936-148935 Capsella grandiflora
Cagra.1268s0042 10.0kb upstream 10.0kb upstream 12162 true Scaffold1268: 131774-143935 Capsella grandiflora
Cagra.1268s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 131774-141773 Capsella grandiflora
Cagra.1268s0042 10.0kb downstream 10.0kb downstream 12162 true Scaffold1268: 141774-153935 Capsella grandiflora
Cagra.1268s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 143936-153935 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365274 5261 Brassicaceae View MSA
123840522 5264 Brassicales-Malvales View MSA
124350317 5266 SBM View MSA
124252724 5268 Malvidae View MSA
124068821 5270 Rosid View MSA
123738596 5271 Pentapetalae View MSA
122792068 5272 Eudicot View MSA
122050502 5273 Angiosperm View MSA
123428969 5275 Viridiplantae View MSA
121350971 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain