Gene : Cagra.1226s0098 C. grandiflora v1.1
Defline:  (1 of 4) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  98
Name:  ? Cagra.1226s0098 Secondary Identifier:  ? PAC:28916525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0098 0.5kb upstream 0.5kb upstream 4706 true Scaffold1226: 405568-410273 Capsella grandiflora
Cagra.1226s0098 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 405568-406067 Capsella grandiflora
Cagra.1226s0098 0.5kb downstream 0.5kb downstream 4706 true Scaffold1226: 406068-410773 Capsella grandiflora
Cagra.1226s0098 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 410274-410773 Capsella grandiflora
Cagra.1226s0098 1.0kb upstream 1.0kb upstream 5206 true Scaffold1226: 405068-410273 Capsella grandiflora
Cagra.1226s0098 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 405068-406067 Capsella grandiflora
Cagra.1226s0098 1.0kb downstream 1.0kb downstream 5206 true Scaffold1226: 406068-411273 Capsella grandiflora
Cagra.1226s0098 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 410274-411273 Capsella grandiflora
Cagra.1226s0098 2.0kb upstream 2.0kb upstream 6206 true Scaffold1226: 404068-410273 Capsella grandiflora
Cagra.1226s0098 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 404068-406067 Capsella grandiflora
Cagra.1226s0098 2.0kb downstream 2.0kb downstream 6206 true Scaffold1226: 406068-412273 Capsella grandiflora
Cagra.1226s0098 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 410274-412273 Capsella grandiflora
Cagra.1226s0098 5.0kb upstream 5.0kb upstream 9206 true Scaffold1226: 401068-410273 Capsella grandiflora
Cagra.1226s0098 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 401068-406067 Capsella grandiflora
Cagra.1226s0098 5.0kb downstream 5.0kb downstream 9206 true Scaffold1226: 406068-415273 Capsella grandiflora
Cagra.1226s0098 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 410274-415273 Capsella grandiflora
Cagra.1226s0098 10.0kb upstream 10.0kb upstream 14206 true Scaffold1226: 396068-410273 Capsella grandiflora
Cagra.1226s0098 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 396068-406067 Capsella grandiflora
Cagra.1226s0098 10.0kb downstream 10.0kb downstream 14206 true Scaffold1226: 406068-420273 Capsella grandiflora
Cagra.1226s0098 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 410274-420273 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367966 5261 Brassicaceae View MSA
123831701 5264 Brassicales-Malvales View MSA
124339713 5266 SBM View MSA
124252893 5268 Malvidae View MSA
124064187 5270 Rosid View MSA
123748363 5271 Pentapetalae View MSA
122787729 5272 Eudicot View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain