Gene : Cagra.1226s0102 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21234:SF21 - PHOSPHORYLASE FAMILY PROTEIN Genomic Order:  102
Name:  ? Cagra.1226s0102 Secondary Identifier:  ? PAC:28916550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0102 0.5kb upstream 0.5kb upstream 2295 true Scaffold1226: 417869-420163 Capsella grandiflora
Cagra.1226s0102 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 417869-418368 Capsella grandiflora
Cagra.1226s0102 0.5kb downstream 0.5kb downstream 2295 true Scaffold1226: 418369-420663 Capsella grandiflora
Cagra.1226s0102 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 420164-420663 Capsella grandiflora
Cagra.1226s0102 1.0kb upstream 1.0kb upstream 2795 true Scaffold1226: 417369-420163 Capsella grandiflora
Cagra.1226s0102 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 417369-418368 Capsella grandiflora
Cagra.1226s0102 1.0kb downstream 1.0kb downstream 2795 true Scaffold1226: 418369-421163 Capsella grandiflora
Cagra.1226s0102 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 420164-421163 Capsella grandiflora
Cagra.1226s0102 2.0kb upstream 2.0kb upstream 3795 true Scaffold1226: 416369-420163 Capsella grandiflora
Cagra.1226s0102 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 416369-418368 Capsella grandiflora
Cagra.1226s0102 2.0kb downstream 2.0kb downstream 3795 true Scaffold1226: 418369-422163 Capsella grandiflora
Cagra.1226s0102 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 420164-422163 Capsella grandiflora
Cagra.1226s0102 5.0kb upstream 5.0kb upstream 6795 true Scaffold1226: 413369-420163 Capsella grandiflora
Cagra.1226s0102 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 413369-418368 Capsella grandiflora
Cagra.1226s0102 5.0kb downstream 5.0kb downstream 6795 true Scaffold1226: 418369-425163 Capsella grandiflora
Cagra.1226s0102 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 420164-425163 Capsella grandiflora
Cagra.1226s0102 10.0kb upstream 10.0kb upstream 11795 true Scaffold1226: 408369-420163 Capsella grandiflora
Cagra.1226s0102 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 408369-418368 Capsella grandiflora
Cagra.1226s0102 10.0kb downstream 10.0kb downstream 11795 true Scaffold1226: 418369-430163 Capsella grandiflora
Cagra.1226s0102 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 420164-430163 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378113 5261 Brassicaceae View MSA
123827945 5264 Brassicales-Malvales View MSA
124347628 5266 SBM View MSA
124250037 5268 Malvidae View MSA
124072910 5270 Rosid View MSA
123748228 5271 Pentapetalae View MSA
122793846 5272 Eudicot View MSA
122048484 5273 Angiosperm View MSA
121344316 5274 Embryophyte View MSA
123425703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain