Gene : Cagra.1255s0002 C. grandiflora v1.1
Defline:  (1 of 11) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  2
Name:  ? Cagra.1255s0002 Secondary Identifier:  ? PAC:28896562
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1121 Capsella grandiflora pathologic  
Cgrandiflora PWY-321 Capsella grandiflora pathologic  
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-5143 Capsella grandiflora pathologic  
Cgrandiflora PWY-5147 Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-5885 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6733 Capsella grandiflora pathologic  
Cgrandiflora PWY-6803 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1255s0002 0.5kb upstream 0.5kb upstream 3513 true Scaffold1255: 8505-12017 Capsella grandiflora
Cagra.1255s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1255: 11518-12017 Capsella grandiflora
Cagra.1255s0002 0.5kb downstream 0.5kb downstream 3513 true Scaffold1255: 8005-11517 Capsella grandiflora
Cagra.1255s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1255: 8005-8504 Capsella grandiflora
Cagra.1255s0002 1.0kb upstream 1.0kb upstream 4013 true Scaffold1255: 8505-12517 Capsella grandiflora
Cagra.1255s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1255: 11518-12517 Capsella grandiflora
Cagra.1255s0002 1.0kb downstream 1.0kb downstream 4013 true Scaffold1255: 7505-11517 Capsella grandiflora
Cagra.1255s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1255: 7505-8504 Capsella grandiflora
Cagra.1255s0002 2.0kb upstream 2.0kb upstream 5013 true Scaffold1255: 8505-13517 Capsella grandiflora
Cagra.1255s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1255: 11518-13517 Capsella grandiflora
Cagra.1255s0002 2.0kb downstream 2.0kb downstream 5013 true Scaffold1255: 6505-11517 Capsella grandiflora
Cagra.1255s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1255: 6505-8504 Capsella grandiflora
Cagra.1255s0002 5.0kb upstream 5.0kb upstream 8013 true Scaffold1255: 8505-16517 Capsella grandiflora
Cagra.1255s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1255: 11518-16517 Capsella grandiflora
Cagra.1255s0002 5.0kb downstream 5.0kb downstream 8013 true Scaffold1255: 3505-11517 Capsella grandiflora
Cagra.1255s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1255: 3505-8504 Capsella grandiflora
Cagra.1255s0002 10.0kb upstream 10.0kb upstream 13013 true Scaffold1255: 8505-21517 Capsella grandiflora
Cagra.1255s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1255: 11518-21517 Capsella grandiflora
Cagra.1255s0002 10.0kb downstream 10.0kb downstream 11517 true Scaffold1255: 1-11517 Capsella grandiflora
Cagra.1255s0002 10.0kb downstream 10.0kb downstream 8504 false Scaffold1255: 1-8504 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375079 5261 Brassicaceae View MSA
123800873 5264 Brassicales-Malvales View MSA
124298235 5266 SBM View MSA
124149930 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain