Gene : Cagra.1225s0115 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10827:SF54 - CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  115
Name:  ? Cagra.1225s0115 Secondary Identifier:  ? PAC:28904079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0115 0.5kb upstream 0.5kb upstream 2064 true Scaffold1225: 420636-422699 Capsella grandiflora
Cagra.1225s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 422200-422699 Capsella grandiflora
Cagra.1225s0115 0.5kb downstream 0.5kb downstream 2064 true Scaffold1225: 420136-422199 Capsella grandiflora
Cagra.1225s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 420136-420635 Capsella grandiflora
Cagra.1225s0115 1.0kb upstream 1.0kb upstream 2564 true Scaffold1225: 420636-423199 Capsella grandiflora
Cagra.1225s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 422200-423199 Capsella grandiflora
Cagra.1225s0115 1.0kb downstream 1.0kb downstream 2564 true Scaffold1225: 419636-422199 Capsella grandiflora
Cagra.1225s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 419636-420635 Capsella grandiflora
Cagra.1225s0115 2.0kb upstream 2.0kb upstream 3564 true Scaffold1225: 420636-424199 Capsella grandiflora
Cagra.1225s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 422200-424199 Capsella grandiflora
Cagra.1225s0115 2.0kb downstream 2.0kb downstream 3564 true Scaffold1225: 418636-422199 Capsella grandiflora
Cagra.1225s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 418636-420635 Capsella grandiflora
Cagra.1225s0115 5.0kb upstream 5.0kb upstream 6564 true Scaffold1225: 420636-427199 Capsella grandiflora
Cagra.1225s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 422200-427199 Capsella grandiflora
Cagra.1225s0115 5.0kb downstream 5.0kb downstream 6564 true Scaffold1225: 415636-422199 Capsella grandiflora
Cagra.1225s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 415636-420635 Capsella grandiflora
Cagra.1225s0115 10.0kb upstream 10.0kb upstream 11564 true Scaffold1225: 420636-432199 Capsella grandiflora
Cagra.1225s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 422200-432199 Capsella grandiflora
Cagra.1225s0115 10.0kb downstream 10.0kb downstream 11564 true Scaffold1225: 410636-422199 Capsella grandiflora
Cagra.1225s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 410636-420635 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372399 5261 Brassicaceae View MSA
123829918 5264 Brassicales-Malvales View MSA
124344512 5266 SBM View MSA
124237315 5268 Malvidae View MSA
124050130 5270 Rosid View MSA
123750102 5271 Pentapetalae View MSA
122788650 5272 Eudicot View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain